RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 WSCD1Q658N2 575 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 CD300LGQ6UXG3 332 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 SYT10Q6XYQ8 523 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 MON1BQ7L1V2 547 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 ACOT1Q86TX2 421 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 ERICH1Q86X53 443 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 SYCE1Q8N0S2 351 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 THEM5Q8N1Q8 247 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 B3GALNT2Q8NCR0 500 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 SLC35G2Q8TBE7 412 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 STK32AQ8WU08 396 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 CPA5Q8WXQ8 436 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 ZNF653Q96CK0 615 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 ZSWIM1Q9BR11 485 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 ACBD6Q9BR61 282 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 TUBB2BQ9BVA1 445 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 IRX2Q9BZI1 471 aaPredicted RBP9.13□□□□□ -0.95
TRAF3-209ENST00000560463 THAP2Q9H0W7 228 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 NRDE2Q9H7Z3 1164 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 MRPL47Q9HD33 250 aaKnown RBP9.13□□□□□ -0.95
TRAF3-209ENST00000560463 CYLDQ9NQC7 956 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 DDX43Q9NXZ2 648 aaKnown RBP9.13□□□□□ -0.95
TRAF3-209ENST00000560463 ADAM22Q9P0K1 906 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 WDR35Q9P2L0 1181 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 HESX1Q9UBX0 185 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 TRIM10Q9UDY6 481 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 CNOT8Q9UFF9 292 aaKnown RBP9.13□□□□□ -0.95
TRAF3-209ENST00000560463 DNAI1Q9UI46 699 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 LCMT1Q9UIC8 334 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 ADAM28Q9UKQ2 775 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 TSPAN16Q9UKR8 245 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 CDH9Q9ULB4 789 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 PCDHB8Q9UN66 801 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 FAN1Q9Y2M0 1017 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 JRKLQ9Y4A0 524 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 SCINQ9Y6U3 715 aa9.13□□□□□ -0.95
TRAF3-209ENST00000560463 CEP290O15078 2479 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 ATG2AQ2TAZ0 1938 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 SYN3O14994 580 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 BUB1O43683 1085 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 TADA2AO75478 443 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 MICAL2O94851 1124 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 UPP2O95045 317 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 MOCS3O95396 460 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 CFHP08603 1231 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 PDGFRBP09619 1106 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 LMO2P25791 158 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 GPD2P43304 727 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 GABRB2P47870 512 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 GSCP56915 257 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-209ENST00000560463 SLC8A3P57103 927 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 WDR5P61964 334 aaKnown RBP9.12□□□□□ -0.95
TRAF3-209ENST00000560463 TAP1Q03518 808 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 FPGSQ05932 587 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 PPP1R26Q5T8A7 1209 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-209ENST00000560463 OVOS1Q6IE37 1185 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 PSRC1Q6PGN9 363 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-209ENST00000560463 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRAF3-209ENST00000560463 OSTM1Q86WC4 334 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 PASD1Q8IV76 773 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 SLC35F6Q8N357 371 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 WDTC1Q8N5D0 677 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 C12orf29Q8N999 325 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 ANKRD52Q8NB46 1076 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 TPCN2Q8NHX9 752 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 ZNF689Q96CS4 500 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-209ENST00000560463 HNRNPABQ99729 332 aaKnown RBP9.12□□□□□ -0.95
TRAF3-209ENST00000560463 NAPGQ99747 312 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-209ENST00000560463 SYT15Q9BQS2 421 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 OXCT2Q9BYC2 517 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-209ENST00000560463 PARVAQ9NVD7 372 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 CTTNBP2NLQ9P2B4 639 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 CACNG4Q9UBN1 327 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 DNAJB4Q9UDY4 337 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 SALL4Q9UJQ4 1053 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 NME7Q9Y5B8 376 aa9.12□□□□□ -0.95
TRAF3-209ENST00000560463 M0QYV0 167 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 B4GALT3O60512 393 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 OAZ2O95190 189 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 FGBP02675 491 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 GALTP07902 379 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 PRLRP16471 622 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 BRCC3P46736 316 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 ALDH7A1P49419 539 aaKnown RBP9.11□□□□□ -0.95
TRAF3-209ENST00000560463 BCAT1P54687 386 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 PLCB3Q01970 1234 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 YWHAHQ04917 246 aaPredicted RBP9.11□□□□□ -0.95
TRAF3-209ENST00000560463 BST2Q10589 180 aaKnown RBP9.11□□□□□ -0.95
TRAF3-209ENST00000560463 PTP4A2Q12974 167 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 ORC1Q13415 861 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 ZNF268Q14587 947 aaPredicted RBP9.11□□□□□ -0.95
TRAF3-209ENST00000560463 GOLGA7BQ2TAP0 167 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 PAN2Q504Q3 1202 aaKnown RBP9.11□□□□□ -0.95
TRAF3-209ENST00000560463 PKDCCQ504Y2 493 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 PLEKHA7Q6IQ23 1121 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 C11orf63Q6NUN7 778 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 DENND1BQ6P3S1 775 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 SLFN11Q7Z7L1 901 aa9.11□□□□□ -0.95
TRAF3-209ENST00000560463 CMTR2Q8IYT2 770 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms