RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 IMPG2Q9BZV3 1241 aa4.55□□□□□ -1.68
LRRC28-218ENST00000560236 ZNF277Q9NRM2 450 aaPredicted RBP4.55□□□□□ -1.68
LRRC28-218ENST00000560236 KLC4Q9NSK0 619 aa4.55□□□□□ -1.68
LRRC28-218ENST00000560236 JKAMPQ9P055 326 aa4.55□□□□□ -1.68
LRRC28-218ENST00000560236 SAP30BPQ9UHR5 308 aaKnown RBP4.55□□□□□ -1.68
LRRC28-218ENST00000560236 PADI4Q9UM07 663 aa4.55□□□□□ -1.68
LRRC28-218ENST00000560236 NR2E3Q9Y5X4 410 aa4.55□□□□□ -1.68
LRRC28-218ENST00000560236 ARHGAP35Q9NRY4 1499 aa4.55□□□□□ -1.68
LRRC28-218ENST00000560236 COL22A1Q8NFW1 1626 aaPredicted RBP4.54□□□□□ -1.68
LRRC28-218ENST00000560236 ZNF804BA4D1E1 1349 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 WASHC2AQ641Q2 1341 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 MAST1Q9Y2H9 1570 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 WDR27A2RRH5 827 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 LINC01548A6NM66 108 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 VWC2LB2RUY7 222 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 GPR39O43194 453 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 URI1O94763 535 aaPredicted RBP4.54□□□□□ -1.68
LRRC28-218ENST00000560236 EYA4O95677 639 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 TTLL1O95922 423 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 WASP42768 502 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 TARDBPQ13148 414 aaKnown RBP eCLIP4.54□□□□□ -1.68
LRRC28-218ENST00000560236 SUMO4Q6EEV6 95 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 DEFB132Q7Z7B7 95 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 CFDP1Q9UEE9 299 aaPredicted RBP4.54□□□□□ -1.68
LRRC28-218ENST00000560236 EFCAB6Q5THR3 1501 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 ASXL1Q8IXJ9 1541 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 DCCP43146 1447 aa4.54□□□□□ -1.68
LRRC28-218ENST00000560236 ARHGEF17Q96PE2 2063 aaPredicted RBP4.53□□□□□ -1.68
LRRC28-218ENST00000560236 PNPLA6Q8IY17 1366 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 SLC43A1O75387 559 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 PRR35P0CG20 571 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 NPTX2P47972 431 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 ERVK-21P61565 698 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 CDC42EP1Q00587 391 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 TFF2Q03403 129 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 CLUL1Q15846 466 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 TMEM119Q4V9L6 283 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 FLYWCH1Q4VC44 716 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 TAPT1Q6NXT6 567 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 ZNF365Q70YC5 407 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 BRINP3Q76B58 766 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 NOP9Q86U38 636 aaKnown RBP4.53□□□□□ -1.68
LRRC28-218ENST00000560236 SPATS2Q86XZ4 545 aaKnown RBP4.53□□□□□ -1.68
LRRC28-218ENST00000560236 CAMKK1Q8N5S9 505 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 AOPEPQ8N6M6 819 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 SLC17A8Q8NDX2 589 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 TMIEQ8NEW7 156 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 WDR66Q8TBY9 1149 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 IFI44Q8TCB0 444 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 COG1Q8WTW3 980 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 LRIG1Q96JA1 1093 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 SLC45A2Q9UMX9 530 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 TBX22Q9Y458 520 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 PCDHA13Q9Y5I0 950 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 RALGAPBQ86X10 1494 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 ARHGAP31Q2M1Z3 1444 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 MYO5BQ9ULV0 1848 aa4.53□□□□□ -1.68
LRRC28-218ENST00000560236 PIK3R4Q99570 1358 aa4.53□□□□□ -1.69
LRRC28-218ENST00000560236 NINLQ9Y2I6 1382 aa4.53□□□□□ -1.69
LRRC28-218ENST00000560236 ADGRA2Q96PE1 1338 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 CAMTA1Q9Y6Y1 1673 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 MBD5Q9P267 1494 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 E7ENX8 843 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 CD1AP06126 327 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 KELP23276 732 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 PTGER1P34995 402 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 ZNF280AP59817 542 aaPredicted RBP4.52□□□□□ -1.69
LRRC28-218ENST00000560236 POU6F2P78424 691 aaPredicted RBP4.52□□□□□ -1.69
LRRC28-218ENST00000560236 SSBP2P81877 361 aaPredicted RBP4.52□□□□□ -1.69
LRRC28-218ENST00000560236 TAP2Q03519 686 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 ZNF626Q68DY1 528 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 ZNF782Q6ZMW2 699 aaPredicted RBP4.52□□□□□ -1.69
LRRC28-218ENST00000560236 TMPRSS9Q7Z410 1059 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 SSH1Q8WYL5 1049 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 HDAC10Q969S8 669 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 PBKQ96KB5 322 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 TRIB1Q96RU8 372 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 EEA1Q15075 1411 aa4.52□□□□□ -1.69
LRRC28-218ENST00000560236 POLR2AP24928 1970 aaKnown RBP4.51□□□□□ -1.69
LRRC28-218ENST00000560236 RPRD2Q5VT52 1461 aaKnown RBP4.51□□□□□ -1.69
LRRC28-218ENST00000560236 A0A0B4J269 797 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 BMP15O95972 392 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 HNRNPCP07910 306 aaKnown RBP eCLIP4.51□□□□□ -1.69
LRRC28-218ENST00000560236 RHOP08100 348 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 EBLN1P0CF75 366 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 NR2F6P10588 404 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 MASP1P48740 699 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 CCT8P50990 548 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 KLF1Q13351 362 aaPredicted RBP4.51□□□□□ -1.69
LRRC28-218ENST00000560236 TUBB3Q13509 450 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 GADL1Q6ZQY3 521 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 ZBTB9Q96C00 473 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 FCRL4Q96PJ5 515 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 SMOQ99835 787 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 ALG8Q9BVK2 526 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 TPSD1Q9BZJ3 242 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 SEMA4CQ9C0C4 833 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 NRIP3Q9NQ35 241 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 GLI3P10071 1580 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 NWD2Q9ULI1 1742 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms