RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ASB16Q96NS5 453 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 ZNF334Q9HCZ1 680 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-213ENST00000560175 GTF3C4Q9UKN8 822 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 MUC6Q6W4X9 2439 aa14.15□□□□□ -0.14
SMAD3-213ENST00000560175 NUP210Q8TEM1 1887 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-213ENST00000560175 ANAPC1Q9H1A4 1944 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 SOBPA7XYQ1 873 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 HCRTO43612 131 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 ATP2C2O75185 946 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 SOAT2O75908 522 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 FGF19O95750 216 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 BMP6P22004 513 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 ACAT1P24752 427 aaKnown RBP14.14□□□□□ -0.15
SMAD3-213ENST00000560175 GNL1P36915 607 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-213ENST00000560175 CLCN5P51795 746 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 VAMP7P51809 220 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 NUBP1P53384 320 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 TRPC3Q13507 836 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 NCOA4Q13772 614 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 SGSM1Q2NKQ1 1148 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 MGAT5BQ3V5L5 792 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 FAM78AQ5JUQ0 283 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 CEP135Q66GS9 1140 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 TANGO2Q6ICL3 276 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 ING5Q8WYH8 240 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 TAF4BQ92750 862 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 ERCC4Q92889 916 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-213ENST00000560175 MYRFLQ96LU7 910 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 CEP295NLQ96MC4 621 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 MRPL45Q9BRJ2 306 aaKnown RBP14.14□□□□□ -0.15
SMAD3-213ENST00000560175 PLA2G2FQ9BZM2 168 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 CRTAC1Q9NQ79 661 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 RAPGEFL1Q9UHV5 662 aa14.14□□□□□ -0.15
SMAD3-213ENST00000560175 ZNF638Q14966 1978 aaKnown RBP14.13□□□□□ -0.15
SMAD3-213ENST00000560175 KRBA1A5PL33 1030 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 KINO60870 393 aaKnown RBP14.13□□□□□ -0.15
SMAD3-213ENST00000560175 ASS1P00966 412 aaKnown RBP14.13□□□□□ -0.15
SMAD3-213ENST00000560175 F11P03951 625 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 MYL4P12829 197 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 CYP2F1P24903 491 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 AVPR2P30518 371 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 GTF2H1P32780 548 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 UBE2HP62256 183 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 GPC5P78333 572 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 PPP3CAQ08209 521 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 MAPRE1Q15691 268 aaKnown RBP14.13□□□□□ -0.15
SMAD3-213ENST00000560175 ANKRD40Q6AI12 368 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 VSTM1Q6UX27 236 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 TMEM150AQ86TG1 271 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 FAM186BQ8IYM0 893 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 MYCBPAPQ8TBZ2 947 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 SMARCD2Q92925 531 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 TRMT2BQ96GJ1 504 aaKnown RBP14.13□□□□□ -0.15
SMAD3-213ENST00000560175 MMS19Q96T76 1030 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 LPIN3Q9BQK8 851 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 SYT15Q9BQS2 421 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 PI4K2AQ9BTU6 479 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 ABI2Q9NYB9 513 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-213ENST00000560175 MAN1B1Q9UKM7 699 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 HCN4Q9Y3Q4 1203 aa14.13□□□□□ -0.15
SMAD3-213ENST00000560175 A0A1W2PRU2 124 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 TULP1O00294 542 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-213ENST00000560175 PHACTR2O75167 634 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 NOL4O94818 638 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 GJA1P17302 382 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 PPP1R2P41236 205 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 PMS1P54277 932 aaKnown RBP14.12□□□□□ -0.15
SMAD3-213ENST00000560175 RPL10AP62906 217 aaKnown RBP14.12□□□□□ -0.15
SMAD3-213ENST00000560175 TNNC1P63316 161 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 FKBP3Q00688 224 aaKnown RBP14.12□□□□□ -0.15
SMAD3-213ENST00000560175 LRRC63Q05C16 580 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 MORC3Q14149 939 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 TEAD2Q15562 447 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 CCDC142Q17RM4 750 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 ZNF667Q5HYK9 610 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 PHLDB3Q6NSJ2 640 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 C4orf50Q6ZRC1 276 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 GPR152Q8TDT2 470 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 E2F7Q96AV8 911 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 DHTKD1Q96HY7 919 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-213ENST00000560175 FAXDC2Q96IV6 333 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 SPATA17Q96L03 361 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 SEPT5Q99719 369 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-213ENST00000560175 DDX23Q9BUQ8 820 aaKnown RBP14.12□□□□□ -0.15
SMAD3-213ENST00000560175 ZFP14Q9HCL3 533 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 TRPV5Q9NQA5 729 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 MAGEC2Q9UBF1 373 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-213ENST00000560175 ZMYM5Q9UJ78 669 aa14.12□□□□□ -0.15
SMAD3-213ENST00000560175 PPP1R3GB7ZBB8 358 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 CETN3O15182 167 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 HLA-DRAP01903 254 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 COL4A2P08572 1712 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 CFHP08603 1231 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 PDGFRBP09619 1106 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 CSH1P0DML2 217 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 CSH2P0DML3 217 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 CD44P16070 742 aaKnown RBP14.11□□□□□ -0.15
SMAD3-213ENST00000560175 PTPN1P18031 435 aaKnown RBP14.11□□□□□ -0.15
SMAD3-213ENST00000560175 CCNE1P24864 410 aa14.11□□□□□ -0.15
SMAD3-213ENST00000560175 GABRR2P28476 465 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms