RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 PSMC1P62191 440 aaKnown RBP19.05■□□□□ 0.64
HDDC3-205ENST00000559898 CYP24A1Q07973 514 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 SNRNP35Q16560 246 aaKnown RBP19.05■□□□□ 0.64
HDDC3-205ENST00000559898 INTS6LQ5JSJ4 861 aaKnown RBP19.05■□□□□ 0.64
HDDC3-205ENST00000559898 TSSK4Q6SA08 328 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 LIMS2Q7Z4I7 341 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 ADGRF2Q8IZF7 708 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 SPPL2BQ8TCT7 592 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 CCDC127Q96BQ5 260 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 ANKRD36BP1Q96IX9 119 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 HSFX1Q9UBD0 423 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 CCL26Q9Y258 94 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 ASB3Q9Y575 518 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 PCDHB5Q9Y5E4 795 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 ANAPC1Q9H1A4 1944 aa19.05■□□□□ 0.64
HDDC3-205ENST00000559898 PRPF40AO75400 957 aaKnown RBP19.04■□□□□ 0.64
HDDC3-205ENST00000559898 F11P03951 625 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 TUFMP49411 452 aaKnown RBP19.04■□□□□ 0.64
HDDC3-205ENST00000559898 BMT2Q1RMZ1 405 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 KMT5BQ4FZB7 885 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 TXNDC11Q6PKC3 985 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 STXBP4Q6ZWJ1 553 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 TRAPPC11Q7Z392 1133 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 DCP1BQ8IZD4 617 aaKnown RBP19.04■□□□□ 0.64
HDDC3-205ENST00000559898 DNASE1L2Q92874 299 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 CLDN23Q96B33 292 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 HPDLQ96IR7 371 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 ACBD6Q9BR61 282 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 MRPL45Q9BRJ2 306 aaKnown RBP19.04■□□□□ 0.64
HDDC3-205ENST00000559898 CRTAC1Q9NQ79 661 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 SPATA6Q9NWH7 488 aaPredicted RBP19.04■□□□□ 0.64
HDDC3-205ENST00000559898 MAGED2Q9UNF1 606 aaPredicted RBP19.04■□□□□ 0.64
HDDC3-205ENST00000559898 HPSEQ9Y251 543 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 PIAS3Q9Y6X2 628 aa19.04■□□□□ 0.64
HDDC3-205ENST00000559898 SLC38A8A6NNN8 435 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 ZNF263O14978 683 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 PDGFRBP09619 1106 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 CCNE1P24864 410 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 TSPY1Q01534 308 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 TNK2Q07912 1038 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 TXNDC8Q6A555 127 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 ZNF852Q6ZMS4 543 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 ITIH5Q86UX2 942 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 TOP6BLQ8N6T0 577 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 DEPDC1BQ8WUY9 529 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 NKD2Q969F2 451 aaPredicted RBP19.03■□□□□ 0.64
HDDC3-205ENST00000559898 CGRRF1Q99675 332 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 GOLPH3LQ9H4A5 285 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 MAGEF1Q9HAY2 307 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 GDPD2Q9HCC8 539 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 GTSE1Q9NYZ3 720 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 CFAP45Q9UL16 551 aa19.03■□□□□ 0.64
HDDC3-205ENST00000559898 F5P12259 2224 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 PVALEFA0A1B0GWK0 134 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 KIAA0391O15091 583 aaKnown RBP19.02■□□□□ 0.64
HDDC3-205ENST00000559898 TNNC2P02585 160 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 SLFN14P0C7P3 912 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 NLRP12P59046 1061 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 FCHO2Q0JRZ9 810 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 GAS6Q14393 721 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 VEPH1Q14D04 833 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 PSMD6Q15008 389 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 KNOP1Q1ED39 458 aaKnown RBP19.02■□□□□ 0.64
HDDC3-205ENST00000559898 DUOXA2Q1HG44 320 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 ATL3Q6DD88 541 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 WDR49Q8IV35 697 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 TMEM86AQ8N2M4 240 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 MAB21L3Q8N8X9 362 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 XXYLT1Q8NBI6 393 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 C2orf15Q8WU43 125 aaKnown RBP19.02■□□□□ 0.64
HDDC3-205ENST00000559898 IRF7Q92985 503 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 SLC22A12Q96S37 553 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 BCO2Q9BYV7 579 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 GPR88Q9GZN0 384 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 DPEP3Q9H4B8 488 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 TASP1Q9H6P5 420 aa19.02■□□□□ 0.64
HDDC3-205ENST00000559898 RBM12Q9NTZ6 932 aaKnown RBP19.02■□□□□ 0.64
HDDC3-205ENST00000559898 UBE4BO95155 1302 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 WDR87Q6ZQQ6 2873 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 TNNI1P19237 187 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 NDUFA8P51970 172 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 MYL6P60660 151 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 MYL7Q01449 175 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 CSTF1Q05048 431 aaKnown RBP19.01■□□□□ 0.63
HDDC3-205ENST00000559898 MTAPQ13126 283 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 FAM171BQ6P995 826 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 CEP57L1Q8IYX8 460 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 ADSSL1Q8N142 457 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 FAM3CQ92520 227 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 MYLPFQ96A32 169 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 SPATA32Q96LK8 384 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 SYT15Q9BQS2 421 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 OSBPL6Q9BZF3 934 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 TMEM30AQ9NV96 361 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 C2orf42Q9NWW7 574 aa19.01■□□□□ 0.63
HDDC3-205ENST00000559898 FRYLO94915 3013 aa19■□□□□ 0.63
HDDC3-205ENST00000559898 CHADO15335 359 aa19■□□□□ 0.63
HDDC3-205ENST00000559898 CMA1P23946 247 aa19■□□□□ 0.63
HDDC3-205ENST00000559898 CACNA2D1P54289 1103 aa19■□□□□ 0.63
HDDC3-205ENST00000559898 DLG4P78352 724 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms