RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PADI4Q9UM07 663 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 CCDC194A0A1B0GVG4 234 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 INO80B-WBP1J3KQ70 363 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 TLR5O60602 858 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 AHSGP02765 367 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 PRKCGP05129 697 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 EBLN1P0CF75 366 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 ALDH9A1P49189 494 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 TOB1P50616 345 aaPredicted RBP4.71□□□□□ -1.66
SPG11-218ENST00000559754 SATB1Q01826 763 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 EXOSC9Q06265 439 aaKnown RBP4.71□□□□□ -1.66
SPG11-218ENST00000559754 KRTAP1-1Q07627 177 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 SRSF4Q08170 494 aaKnown RBP4.71□□□□□ -1.66
SPG11-218ENST00000559754 PLS1Q14651 629 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 GORABQ5T7V8 394 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 TMEM108Q6UXF1 575 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 C1GALT1C1Q96EU7 318 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 SLC35A4Q96G79 324 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 PCGF6Q9BYE7 350 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 INO80BQ9C086 356 aaPredicted RBP4.71□□□□□ -1.66
SPG11-218ENST00000559754 CNNM1Q9NRU3 951 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 MRPS18AQ9NVS2 196 aaKnown RBP4.71□□□□□ -1.66
SPG11-218ENST00000559754 IP6K2Q9UHH9 426 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 STXBP5LQ9Y2K9 1186 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 PLEKHM1Q9Y4G2 1056 aa4.71□□□□□ -1.66
SPG11-218ENST00000559754 ARHGEF17Q96PE2 2063 aaPredicted RBP4.71□□□□□ -1.66
SPG11-218ENST00000559754 E2F8A0AVK6 867 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 OFD1O75665 1012 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 ONECUT2O95948 504 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 DRD4P21917 467 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 KCNJ5P48544 419 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 SOX8P57073 446 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 LOXL3P58215 753 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 SLC10A2Q12908 348 aaPredicted RBP4.7□□□□□ -1.66
SPG11-218ENST00000559754 IQCB1Q15051 598 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 LONRF3Q496Y0 759 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 ATAT1Q5SQI0 421 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 VPS53Q5VIR6 699 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 CEP85Q6P2H3 762 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 ANKRD16Q6P6B7 361 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 ZNF804AQ7Z570 1209 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 DTX2Q86UW9 622 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 KLHDC4Q8TBB5 520 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 TBC1D5Q92609 795 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 ANKS1AQ92625 1134 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 HPS3Q969F9 1004 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 HOOK2Q96ED9 719 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 SLC46A1Q96NT5 459 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 GEMIN8Q9NWZ8 242 aaKnown RBP4.7□□□□□ -1.66
SPG11-218ENST00000559754 HESX1Q9UBX0 185 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 ADAM21Q9UKJ8 722 aa4.7□□□□□ -1.66
SPG11-218ENST00000559754 MANSC4A6NHS7 340 aaPredicted RBP4.69□□□□□ -1.66
SPG11-218ENST00000559754 LINC01548A6NM66 108 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 SLC16A3O15427 465 aaKnown RBP4.69□□□□□ -1.66
SPG11-218ENST00000559754 MAP4K4O95819 1239 aaPredicted RBP4.69□□□□□ -1.66
SPG11-218ENST00000559754 HNRNPCP07910 306 aaKnown RBP eCLIP4.69□□□□□ -1.66
SPG11-218ENST00000559754 FAM163BP0C2L3 166 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 PF4V1P10720 104 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 ABCG1P45844 678 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 PXNP49023 591 aaPredicted RBP4.69□□□□□ -1.66
SPG11-218ENST00000559754 LLGL1Q15334 1064 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 KHDC1LQ5JSQ8 128 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 IFIT1BQ5T764 474 aaKnown RBP4.69□□□□□ -1.66
SPG11-218ENST00000559754 WDR53Q7Z5U6 358 aaPredicted RBP4.69□□□□□ -1.66
SPG11-218ENST00000559754 CCAR1Q8IX12 1150 aaKnown RBP4.69□□□□□ -1.66
SPG11-218ENST00000559754 GRAMD1CQ8IYS0 662 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 PCSK9Q8NBP7 692 aaKnown RBP4.69□□□□□ -1.66
SPG11-218ENST00000559754 SEMA6DQ8NFY4 1073 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 PTDSS2Q9BVG9 487 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 TTYH3Q9C0H2 523 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 DKK3Q9UBP4 350 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 PNMA8BQ9ULN7 279 aaPredicted RBP4.69□□□□□ -1.66
SPG11-218ENST00000559754 G3BP2Q9UN86 482 aaKnown RBP4.69□□□□□ -1.66
SPG11-218ENST00000559754 SH2B3Q9UQQ2 575 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 AOX1Q06278 1338 aa4.69□□□□□ -1.66
SPG11-218ENST00000559754 QSOX1O00391 747 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 PPM1DO15297 605 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 ALDH1L1O75891 902 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 DNAJB5O75953 348 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 JTBO76095 146 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 ABLIM3O94929 683 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 THP07101 528 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 HDCP19113 662 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 PPIFP30405 207 aaKnown RBP4.68□□□□□ -1.66
SPG11-218ENST00000559754 VIPR2P41587 438 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 EIF2B5Q13144 721 aaKnown RBP4.68□□□□□ -1.66
SPG11-218ENST00000559754 BOP1Q14137 746 aaKnown RBP4.68□□□□□ -1.66
SPG11-218ENST00000559754 AARS2Q5JTZ9 985 aaKnown RBP4.68□□□□□ -1.66
SPG11-218ENST00000559754 LRCH2Q5VUJ6 765 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 SLC29A4Q7RTT9 530 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 EXOC8Q8IYI6 725 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 MORC4Q8TE76 937 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 CCDC136Q96JN2 1154 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 CGRRF1Q99675 332 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 FLRT1Q9NZU1 646 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 PCDHA6Q9UN73 950 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 SHOC2Q9UQ13 582 aa4.68□□□□□ -1.66
SPG11-218ENST00000559754 WIPF3A6NGB9 483 aa4.67□□□□□ -1.66
SPG11-218ENST00000559754 DNAJC9-AS1A6NH13 148 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms