RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 HCRTO43612 131 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 PRAMEF12O95522 483 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 LMNAP02545 664 aaKnown RBP20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 HMGA1P17096 107 aaKnown RBP20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 WEE1P30291 646 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 MYL7Q01449 175 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 DNM1Q05193 864 aaKnown RBP20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 SURF1Q15526 300 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 TAF12Q16514 161 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 CCDC142Q17RM4 750 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 SOWAHAQ2M3V2 549 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 ZNF528Q3MIS6 628 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 ZC3H14Q6PJT7 736 aaKnown RBP20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 TMEM150AQ86TG1 271 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 ADGRF2Q8IZF7 708 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 SPATA18Q8TC71 538 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 FAM3CQ92520 227 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 TASP1Q9H6P5 420 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 KIAA1586Q9HCI6 787 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 OBP2AQ9NY56 170 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 FAM13BQ9NYF5 915 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 OTOGLQ3ZCN5 2332 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 ZNF638Q14966 1978 aaKnown RBP20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 UBE4BO95155 1302 aa20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 KIF26AQ9ULI4 1882 aaPredicted RBP20.5■□□□□ 0.87
KNSTRN-208ENST00000559604 GABRDO14764 452 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 PRPF40AO75400 957 aaKnown RBP20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 TNNC2P02585 160 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 MLLT6P55198 1093 aaPredicted RBP20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 CSTF1Q05048 431 aaKnown RBP20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 CUL4BQ13620 913 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 DUOXA2Q1HG44 320 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 LIMS2Q7Z4I7 341 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 NELFCDQ8IXH7 590 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 STKLD1Q8NE28 680 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 HPDLQ96IR7 371 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 GCNAQ96QF7 691 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 SLC46A2Q9BY10 475 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 RCOR1Q9UKL0 485 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 GTF3C4Q9UKN8 822 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 CFAP45Q9UL16 551 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 FRYLO94915 3013 aa20.49■□□□□ 0.87
KNSTRN-208ENST00000559604 DPYSL4O14531 572 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 CLIC2O15247 247 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 F11P03951 625 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 CCNE1P24864 410 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 CYP2F1P24903 491 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 AFMP43652 599 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 LHX1P48742 406 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 NLRP12P59046 1061 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 MYO1EQ12965 1108 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 MTAPQ13126 283 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 SNRNP35Q16560 246 aaKnown RBP20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 DDR2Q16832 855 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 ARHGAP29Q52LW3 1261 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 SDHAF4Q5VUM1 108 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 WDR49Q8IV35 697 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 GRAMD1CQ8IYS0 662 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 RDH13Q8NBN7 331 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 CSGALNACT1Q8TDX6 532 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 KBTBD7Q8WVZ9 684 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 ZFYVE19Q96K21 471 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 SMG9Q9H0W8 520 aaKnown RBP20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 CHRDQ9H2X0 955 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 ABCB6Q9NP58 842 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 SLC39A2Q9NP94 309 aa20.48■□□□□ 0.87
KNSTRN-208ENST00000559604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 PVALEFA0A1B0GWK0 134 aa20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 MYBPHLA2RUH7 354 aa20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 SOX9P48436 509 aa20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 CYP2J2P51589 502 aa20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 SNRPFP62306 86 aaKnown RBP20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 BMT2Q1RMZ1 405 aa20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 DPH6Q7L8W6 267 aa20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 TRAPPC11Q7Z392 1133 aa20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 LMAN1LQ9HAT1 526 aa20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 PRMT8Q9NR22 394 aaPredicted RBP20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 R3HCC1Q9Y3T6 440 aaKnown RBP20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 GPR179Q6PRD1 2367 aa20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 GREB1Q4ZG55 1949 aa20.47■□□□□ 0.87
KNSTRN-208ENST00000559604 SLC38A8A6NNN8 435 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 ATP2C2O75185 946 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 CSH1P0DML2 217 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 CSH2P0DML3 217 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 DLATP10515 647 aaKnown RBP20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 CHRNB1P11230 501 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 PCSK1P29120 753 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 RPL10AP62906 217 aaKnown RBP20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 CYP24A1Q07973 514 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 PSMD6Q15008 389 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 CFAP221Q4G0U5 840 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 FAM171BQ6P995 826 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 TSSK4Q6SA08 328 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 CMTM8Q8IZV2 173 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 XXYLT1Q8NBI6 393 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 BPIFB1Q8TDL5 484 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 NELL1Q92832 810 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 GZF1Q9H116 711 aaPredicted RBP20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 GTSE1Q9NYZ3 720 aa20.46■□□□□ 0.87
KNSTRN-208ENST00000559604 SERTAD1Q9UHV2 236 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms