RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 GIPC2Q8TF65 315 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 TMEM174Q8WUU8 243 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 SMARCD2Q92925 531 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 ELSPBP1Q96BH3 223 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 ZSWIM3Q96MP5 696 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 ASB16Q96NS5 453 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 ARHGEF3Q9NR81 526 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 TRAF3IP3Q9Y228 551 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 FRMD4BQ9Y2L6 1034 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 ZNF638Q14966 1978 aaKnown RBP13.49□□□□□ -0.25
LRRC28-214ENST00000559433 TICRRQ7Z2Z1 1910 aa13.49□□□□□ -0.25
LRRC28-214ENST00000559433 H0Y858 1186 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 AOC1P19801 751 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 WARSP23381 471 aaKnown RBP13.48□□□□□ -0.25
LRRC28-214ENST00000559433 GABRR2P28476 465 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 AP3M2P53677 418 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 MYL6P60660 151 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 PSMC1P62191 440 aaKnown RBP13.48□□□□□ -0.25
LRRC28-214ENST00000559433 SNW1Q13573 536 aaKnown RBP13.48□□□□□ -0.25
LRRC28-214ENST00000559433 CCDC142Q17RM4 750 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 WDR72Q3MJ13 1102 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 SLC44A4Q53GD3 710 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 ARHGAP15Q53QZ3 475 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 TDRD10Q5VZ19 366 aaKnown RBP13.48□□□□□ -0.25
LRRC28-214ENST00000559433 LIMS2Q7Z4I7 341 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 SPATA2LQ8IUW3 424 aaPredicted RBP13.48□□□□□ -0.25
LRRC28-214ENST00000559433 GUF1Q8N442 669 aaKnown RBP13.48□□□□□ -0.25
LRRC28-214ENST00000559433 ZSCAN18Q8TBC5 510 aaPredicted RBP13.48□□□□□ -0.25
LRRC28-214ENST00000559433 PARD3BQ8TEW8 1205 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 KBTBD7Q8WVZ9 684 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
LRRC28-214ENST00000559433 GCNAQ96QF7 691 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 PKMYT1Q99640 499 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 SYT15Q9BQS2 421 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 PLA2G2FQ9BZM2 168 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 SNX25Q9H3E2 840 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 ATXN3LQ9H3M9 355 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 TBC1D17Q9HA65 648 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 ABCB6Q9NP58 842 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 GTF3C4Q9UKN8 822 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 SIT1Q9Y3P8 196 aa13.48□□□□□ -0.25
LRRC28-214ENST00000559433 COL4A3Q01955 1670 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 GREB1Q4ZG55 1949 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 DPYSL4O14531 572 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 NR2F2P24468 414 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 CYP2F1P24903 491 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 LMO2P25791 158 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 ATICP31939 592 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 GPR15P49685 360 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 DLG4P78352 724 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 CLDN10P78369 228 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 GRM2Q14416 872 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 STXBP5Q5T5C0 1151 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 PHLDB3Q6NSJ2 640 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 GAREM2Q75VX8 874 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 YAF2Q8IY57 180 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 SMYD4Q8IYR2 804 aaPredicted RBP13.47□□□□□ -0.25
LRRC28-214ENST00000559433 STKLD1Q8NE28 680 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 ENGASEQ8NFI3 743 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 E2F7Q96AV8 911 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 MRPL45Q9BRJ2 306 aaKnown RBP13.47□□□□□ -0.25
LRRC28-214ENST00000559433 TRMT61BQ9BVS5 477 aaKnown RBP13.47□□□□□ -0.25
LRRC28-214ENST00000559433 XYLT2Q9H1B5 865 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 BRD9Q9H8M2 597 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 NXF1Q9UBU9 619 aaKnown RBP13.47□□□□□ -0.25
LRRC28-214ENST00000559433 HOOK1Q9UJC3 728 aaKnown RBP13.47□□□□□ -0.25
LRRC28-214ENST00000559433 CDH9Q9ULB4 789 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 COL4A2P08572 1712 aa13.47□□□□□ -0.25
LRRC28-214ENST00000559433 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 PI15O43692 258 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 ATP2C2O75185 946 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 TACC1O75410 805 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 SMC2O95347 1197 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 STAU1O95793 577 aaKnown RBP13.46□□□□□ -0.25
LRRC28-214ENST00000559433 PDGFRBP09619 1106 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 RPL13P26373 211 aaKnown RBP13.46□□□□□ -0.25
LRRC28-214ENST00000559433 CDC25CP30307 473 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 GNL1P36915 607 aaPredicted RBP13.46□□□□□ -0.25
LRRC28-214ENST00000559433 VIPR2P41587 438 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 RPL10AP62906 217 aaKnown RBP13.46□□□□□ -0.25
LRRC28-214ENST00000559433 CYP4F8P98187 520 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 CYP27A1Q02318 531 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 PRKCQQ04759 706 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 TCF15Q12870 199 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 NCOA4Q13772 614 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 MAPRE1Q15691 268 aaKnown RBP13.46□□□□□ -0.25
LRRC28-214ENST00000559433 NFIL3Q16649 462 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 ZNF699Q32M78 642 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 CFAP221Q4G0U5 840 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 GPR158Q5T848 1215 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 SDHAF4Q5VUM1 108 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 FAM171BQ6P995 826 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 C4orf50Q6ZRC1 276 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 DTWD2Q8NBA8 298 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 TMC2Q8TDI7 906 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 MYLPFQ96A32 169 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 FUBP3Q96I24 572 aaKnown RBP eCLIP13.46□□□□□ -0.25
LRRC28-214ENST00000559433 TRPV4Q9HBA0 871 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms