RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 STXBP5Q5T5C0 1151 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 IER5LQ5T953 404 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 CEP135Q66GS9 1140 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
SPG11-216ENST00000559347 GAREM2Q75VX8 874 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 SMYD4Q8IYR2 804 aaPredicted RBP11.73□□□□□ -0.53
SPG11-216ENST00000559347 TMEM105Q8N8V8 129 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 ELSPBP1Q96BH3 223 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 ZSWIM3Q96MP5 696 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 SYT15Q9BQS2 421 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 XYLT2Q9H1B5 865 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 ABCB6Q9NP58 842 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 GTF3C4Q9UKN8 822 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 CA14Q9ULX7 337 aa11.73□□□□□ -0.53
SPG11-216ENST00000559347 MAPK13O15264 365 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 TACC1O75410 805 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 VNN1O95497 513 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 FGF19O95750 216 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 AOC1P19801 751 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 LMO2P25791 158 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 GABRR2P28476 465 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 ATICP31939 592 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 GPR15P49685 360 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 CLCN5P51795 746 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 AP3M2P53677 418 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 PSMC1P62191 440 aaKnown RBP11.72□□□□□ -0.53
SPG11-216ENST00000559347 TNNC1P63316 161 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 GPC5P78333 572 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 BIRC3Q13489 604 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 TRPC3Q13507 836 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 ZNF699Q32M78 642 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 WDR72Q3MJ13 1102 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 CFAP221Q4G0U5 840 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 C1orf220Q5T0J3 134 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 TANGO2Q6ICL3 276 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 DNAJB7Q7Z6W7 309 aaPredicted RBP11.72□□□□□ -0.53
SPG11-216ENST00000559347 STKLD1Q8NE28 680 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 FLCNQ8NFG4 579 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 SPATA20Q8TB22 786 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 ZSCAN18Q8TBC5 510 aaPredicted RBP11.72□□□□□ -0.53
SPG11-216ENST00000559347 FAM200AQ8TCP9 573 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 TMC2Q8TDI7 906 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 SMARCD2Q92925 531 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 SYAP1Q96A49 352 aaPredicted RBP11.72□□□□□ -0.53
SPG11-216ENST00000559347 FUBP3Q96I24 572 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPG11-216ENST00000559347 TIGD1Q96MW7 591 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 MMS19Q96T76 1030 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 MRPL45Q9BRJ2 306 aaKnown RBP11.72□□□□□ -0.53
SPG11-216ENST00000559347 PI4K2AQ9BTU6 479 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 MKNK1Q9BUB5 465 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 PLA2G2FQ9BZM2 168 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 SLITRK6Q9H5Y7 841 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 VRTNQ9H8Y1 702 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 TRPV4Q9HBA0 871 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 IL21Q9HBE4 155 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 CRTAC1Q9NQ79 661 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 RMND1Q9NWS8 449 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 CDH9Q9ULB4 789 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 FRMD4BQ9Y2L6 1034 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 NME7Q9Y5B8 376 aa11.72□□□□□ -0.53
SPG11-216ENST00000559347 MYBPHLA2RUH7 354 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 PHACTR2O75167 634 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 ATP2C2O75185 946 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 AKAP3O75969 853 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 C4BPAP04003 597 aaKnown RBP11.71□□□□□ -0.53
SPG11-216ENST00000559347 HMGA1P17096 107 aaKnown RBP11.71□□□□□ -0.53
SPG11-216ENST00000559347 CYP2F1P24903 491 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 CYP4F8P98187 520 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 NCOA4Q13772 614 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 GRM2Q14416 872 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 EDRF1Q3B7T1 1238 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 ZACNQ401N2 412 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 COBLL1Q53SF7 1204 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 ZNF658Q5TYW1 1059 aaPredicted RBP11.71□□□□□ -0.53
SPG11-216ENST00000559347 FAM171BQ6P995 826 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 VITQ6UXI7 678 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 SPATA2LQ8IUW3 424 aaPredicted RBP11.71□□□□□ -0.53
SPG11-216ENST00000559347 GIPC2Q8TF65 315 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 ERCC4Q92889 916 aaPredicted RBP11.71□□□□□ -0.53
SPG11-216ENST00000559347 MYLPFQ96A32 169 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 FAM122AQ96E09 287 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 GSDMAQ96QA5 445 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 PRRX2Q99811 253 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 GPR88Q9GZN0 384 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 SMYD3Q9H7B4 428 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 TBC1D17Q9HA65 648 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 ZFP14Q9HCL3 533 aa11.71□□□□□ -0.53
SPG11-216ENST00000559347 TADA3O75528 432 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 TRIM49P0CI25 452 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 TRIM49CP0CI26 452 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 CDC25CP30307 473 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 VIPR2P41587 438 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 MAGEA11P43364 429 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 NUBP1P53384 320 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 RPL10AP62906 217 aaKnown RBP11.7□□□□□ -0.54
SPG11-216ENST00000559347 PFKPQ01813 784 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 NHLH1Q02575 133 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 ENPEPQ07075 957 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 TCF15Q12870 199 aa11.7□□□□□ -0.54
SPG11-216ENST00000559347 MLF2Q15773 248 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms