RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CEP57Q86XR8 500 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 THEM5Q8N1Q8 247 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 B3GALNT2Q8NCR0 500 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 OR6B3Q8NGW1 331 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 MYCBPAPQ8TBZ2 947 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 SLC22A17Q8WUG5 538 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 SYN2Q92777 582 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 TMEM176AQ96HP8 235 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 SYT15Q9BQS2 421 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 TMLHEQ9NVH6 421 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 AIPL1Q9NZN9 384 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 KIAA1257Q9ULG3 409 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 MAFFQ9ULX9 164 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 CDY1Q9Y6F8 540 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 PATJQ8NI35 1801 aa15.78■□□□□ 0.12
SNRPA1-207ENST00000559309 ATP2C2O75185 946 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 FOSL2P15408 326 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 TRIM21P19474 475 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 ACAT1P24752 427 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 OR1D2P34982 312 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 TRIM14Q14142 442 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 ARHGAP44Q17R89 818 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 CFAP221Q4G0U5 840 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 PKDCCQ504Y2 493 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 E4F1Q66K89 784 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 TPGS2Q68CL5 300 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 KIAA1841Q6NSI8 718 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 TMEM270Q6UE05 265 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 IRF2BP2Q7Z5L9 587 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 ADGRD2Q7Z7M1 963 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 RBBP8NLQ8NC74 664 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 ZNF461Q8TAF7 563 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 DDX1Q92499 740 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 TNIP3Q96KP6 325 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 DNAJC7Q99615 494 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 SNX25Q9H3E2 840 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 PRDM12Q9H4Q4 367 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 NLRC4Q9NPP4 1024 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 ENTPD7Q9NQZ7 604 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.77■□□□□ 0.125e-8■□□□□ 11.1
SNRPA1-207ENST00000559309 MTCH2Q9Y6C9 303 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 MYO7AQ13402 2215 aa15.77■□□□□ 0.12
SNRPA1-207ENST00000559309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 MTMR11A4FU01 709 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 CLASP2O75122 1294 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 PDGFRBP09619 1106 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 PNMA6AP0CW24 399 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 ATF2P15336 505 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 RPL17P18621 184 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 CASP14P31944 242 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 SOX5P35711 763 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 PRKCIP41743 596 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 CLCN4P51793 760 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 ZBED6P86452 979 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 PTPROQ16827 1216 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 DUSP6Q16828 381 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 PLPP4Q5VZY2 271 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 HGSNATQ68CP4 663 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 TMEM184AQ6ZMB5 413 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 FUKQ8N0W3 1084 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 C2orf15Q8WU43 125 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 TFAP2BQ92481 460 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 PCED1BQ96HM7 432 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 FUBP3Q96I24 572 aaKnown RBP eCLIP15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 HNRNPABQ99729 332 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 LPIN3Q9BQK8 851 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 CRISPLD1Q9H336 500 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 ABCB6Q9NP58 842 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 AFF4Q9UHB7 1163 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 NOCTQ9UK39 431 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 FBXW11Q9UKB1 542 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 GTF3C4Q9UKN8 822 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 PCDHB4Q9Y5E5 795 aa15.76■□□□□ 0.11
SNRPA1-207ENST00000559309 LRRC53A6NM62 1247 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 O00370 1275 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 C2CD2LO14523 706 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 OR4Q2P0C623 313 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 VDRP11473 427 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 FECHP22830 423 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 STAT1P42224 750 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 PSMC1P62191 440 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 TSPY1Q01534 308 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 MAPRE1Q15691 268 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 NFE2Q16621 373 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 RTL10Q7L3V2 364 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 ACOT1Q86TX2 421 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 TCEAL8Q8IYN2 117 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 DCP1BQ8IZD4 617 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 C12orf29Q8N999 325 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 EPS8L1Q8TE68 723 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 HDAC7Q8WUI4 952 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 PDLIM2Q96JY6 352 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 CDCA3Q99618 268 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 EMILIN2Q9BXX0 1053 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 B3GNT5Q9BYG0 378 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 NUCKS1Q9H1E3 243 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 CSNK1G1Q9HCP0 422 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 ACP6Q9NPH0 428 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 TMEM30AQ9NV96 361 aa15.75■□□□□ 0.11
SNRPA1-207ENST00000559309 PCDHGC3Q9UN70 934 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms