RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 HMGA1P17096 107 aaKnown RBP17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 AMPD2Q01433 879 aa17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 TXNDC8Q6A555 127 aa17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 DCP1BQ8IZD4 617 aaKnown RBP17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 LRRC15Q8TF66 581 aa17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 CALML4Q96GE6 196 aa17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 ZC3H10Q96K80 434 aaKnown RBP17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 CCSER1Q9C0I3 900 aa17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 ZHX3Q9H4I2 956 aa17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 FBRSL1Q9HCM7 1045 aaKnown RBP17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 TDP1Q9NUW8 608 aa17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 POLR3BQ9NW08 1133 aaPredicted RBP17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 DPP3Q9NY33 737 aa17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 KIF3AQ9Y496 699 aa17.54■□□□□ 0.4
CDC42BPB-205ENST00000559245 TISP43B9A030 160 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 SLC26A4O43511 780 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 KRT18P05783 430 aaKnown RBP17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 NEFLP07196 543 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 DRD1P21728 446 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 MPLP40238 635 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 SHC2P98077 582 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 GTF2BQ00403 316 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 ADALQ6DHV7 355 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 CC2D1AQ6P1N0 951 aaPredicted RBP17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 RIN3Q8TB24 985 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 MRPS31Q92665 395 aaKnown RBP17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 AK8Q96MA6 479 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 HHIPQ96QV1 700 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 FIZ1Q96SL8 496 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 KIF2CQ99661 725 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 BLOC1S4Q9NUP1 217 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 AGO2Q9UKV8 859 aaKnown RBP17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 MAGED2Q9UNF1 606 aaPredicted RBP17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 PCDHB5Q9Y5E4 795 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 CACNA1GO43497 2377 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 PTPRDP23468 1912 aa17.53■□□□□ 0.4
CDC42BPB-205ENST00000559245 SOBPA7XYQ1 873 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 KPNA7A9QM74 516 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 KCNK5O95279 499 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 ABCD1P33897 745 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 UBA7P41226 1012 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 GPR15P49685 360 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 GALK1P51570 392 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 MCM6Q14566 821 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 SV2CQ496J9 727 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 PLK5Q496M5 336 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 ZC2HC1CQ53FD0 456 aaPredicted RBP17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 SLFN12LQ6IEE8 588 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 MON1AQ86VX9 555 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 STKLD1Q8NE28 680 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 P2RY13Q9BPV8 354 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 PI4K2AQ9BTU6 479 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 VPS45Q9NRW7 570 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 TMLHEQ9NVH6 421 aa17.52■□□□□ 0.4
CDC42BPB-205ENST00000559245 FRYQ5TBA9 3013 aa17.52■□□□□ 0.39
CDC42BPB-205ENST00000559245 TBCAO75347 108 aaKnown RBP17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 PRPF40AO75400 957 aaKnown RBP17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 CSH1P0DML2 217 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 CSH2P0DML3 217 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 GJA4P35212 333 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 TSPY1Q01534 308 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 ZNF268Q14587 947 aaPredicted RBP17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 PDGFRLQ15198 375 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 RNF43Q68DV7 783 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 NAIF1Q69YI7 327 aaPredicted RBP17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 EFCAB13Q8IY85 973 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 RPLP0P6Q8NHW5 317 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 EXOC4Q96A65 974 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 DUSP15Q9H1R2 295 aaPredicted RBP17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 PPP4R2Q9NY27 417 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 STYXL1Q9Y6J8 313 aa17.51■□□□□ 0.39
CDC42BPB-205ENST00000559245 FAM208BQ5VWN6 2430 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 PLCG1P19174 1290 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 POU5F1Q01860 360 aaKnown RBP17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 MTF1Q14872 753 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 ELF2Q15723 593 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 NFE2Q16621 373 aaPredicted RBP17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 FBXO43Q4G163 708 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 SDHAF4Q5VUM1 108 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 TCEAL6Q6IPX3 200 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 CRELD2Q6UXH1 353 aaPredicted RBP17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 CPA6Q8N4T0 437 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 RAD54LQ92698 747 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 TCEAL3Q969E4 200 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 ZNF560Q96MR9 790 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 ECT2Q9H8V3 914 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 MYOFQ9NZM1 2061 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 PI4KAP42356 2102 aa17.5■□□□□ 0.39
CDC42BPB-205ENST00000559245 H3BQV1 296 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 DCLK1O15075 740 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 TADA3O75528 432 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 RHOBTB1O94844 696 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 KARSQ15046 597 aaKnown RBP17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 DDR2Q16832 855 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 SYT13Q7L8C5 426 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 NT5DC4Q86YG4 428 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 RASSF8Q8NHQ8 419 aa17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 LEO1Q8WVC0 666 aaPredicted RBP17.49■□□□□ 0.39
CDC42BPB-205ENST00000559245 OSCP1Q8WVF1 389 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms