RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 DUS2Q9NX74 493 aaKnown RBP13.3□□□□□ -0.28
TRPM1-210ENST00000559179 CCL26Q9Y258 94 aa13.3□□□□□ -0.28
TRPM1-210ENST00000559179 C2CD2Q9Y426 696 aa13.3□□□□□ -0.28
TRPM1-210ENST00000559179 NCOR2Q9Y618 2525 aa13.3□□□□□ -0.28
TRPM1-210ENST00000559179 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 ANO9A1A5B4 782 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 TRDMT1O14717 391 aaKnown RBP13.29□□□□□ -0.28
TRPM1-210ENST00000559179 SLC26A4O43511 780 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 FAM189A1O60320 539 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 HUS1O60921 280 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 IL18RAPO95256 599 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 CKMP06732 381 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 ADRB2P07550 413 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 KRT19P08727 400 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 ARSAP15289 507 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 PLCG1P19174 1290 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 GJB2P29033 226 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 MPLP40238 635 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 PNPLA4P41247 253 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 GPR15P49685 360 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 DGKEP52429 567 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 LIMK1P53667 647 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 MYL7Q01449 175 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 NR1H3Q13133 447 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 KARSQ15046 597 aaKnown RBP13.29□□□□□ -0.28
TRPM1-210ENST00000559179 POSTNQ15063 836 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 PDGFRLQ15198 375 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 NFE2Q16621 373 aaPredicted RBP13.29□□□□□ -0.28
TRPM1-210ENST00000559179 TTC30AQ86WT1 665 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 SCN4BQ8IWT1 228 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 STKLD1Q8NE28 680 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 RPLP0P6Q8NHW5 317 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 CACTINQ8WUQ7 758 aaKnown RBP13.29□□□□□ -0.28
TRPM1-210ENST00000559179 RAD54LQ92698 747 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 FAM83CQ9BQN1 747 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 HPS4Q9NQG7 708 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 VPS45Q9NRW7 570 aa13.29□□□□□ -0.28
TRPM1-210ENST00000559179 UXTQ9UBK9 157 aaPredicted RBP13.29□□□□□ -0.28
TRPM1-210ENST00000559179 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
TRPM1-210ENST00000559179 TRAV19A0A0A6YYK7 116 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 TISP43B9A030 160 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 F11P03951 625 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 GTF2BQ00403 316 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 MTF1Q14872 753 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 DDR2Q16832 855 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 FBXO43Q4G163 708 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 SLC39A4Q6P5W5 647 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 DYMQ7RTS9 669 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 MON1AQ86VX9 555 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 SPATA2LQ8IUW3 424 aaPredicted RBP13.28□□□□□ -0.28
TRPM1-210ENST00000559179 SYCP3Q8IZU3 236 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 FSIP1Q8NA03 581 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 LARP4BQ92615 738 aaKnown RBP13.28□□□□□ -0.28
TRPM1-210ENST00000559179 CHFRQ96EP1 664 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 FAM213AQ9BRX8 229 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 MRPL44Q9H9J2 332 aaKnown RBP13.28□□□□□ -0.28
TRPM1-210ENST00000559179 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
TRPM1-210ENST00000559179 RXFP3Q9NSD7 469 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 POLR3BQ9NW08 1133 aaPredicted RBP13.28□□□□□ -0.28
TRPM1-210ENST00000559179 DDX43Q9NXZ2 648 aaKnown RBP13.28□□□□□ -0.28
TRPM1-210ENST00000559179 AGAP1Q9UPQ3 857 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 EXOC7Q9UPT5 735 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 INVSQ9Y283 1065 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 PCDHGA5Q9Y5G8 931 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 ATG2BQ96BY7 2078 aa13.28□□□□□ -0.28
TRPM1-210ENST00000559179 GREB1Q4ZG55 1949 aa13.27□□□□□ -0.28
TRPM1-210ENST00000559179 AKAP3O75969 853 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 APBB3O95704 486 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 ITGB3P05106 788 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 USP17L7P0C7H9 530 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 ACAT1P24752 427 aaKnown RBP13.27□□□□□ -0.29
TRPM1-210ENST00000559179 CYP2F1P24903 491 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 POLR2BP30876 1174 aaKnown RBP13.27□□□□□ -0.29
TRPM1-210ENST00000559179 GJA4P35212 333 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 RAP1GAPP47736 663 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 ZNF131P52739 623 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 PSAPL1Q6NUJ1 521 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 CSGALNACT2Q8N6G5 542 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 CD101Q93033 1021 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 ATP2A3Q93084 1043 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 ACDQ96AP0 544 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 EDEM2Q9BV94 578 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 ECT2Q9H8V3 914 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 FBRSL1Q9HCM7 1045 aaKnown RBP13.27□□□□□ -0.29
TRPM1-210ENST00000559179 TMLHEQ9NVH6 421 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 TBC1D7Q9P0N9 293 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 SMC3Q9UQE7 1217 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 TSC2P49815 1807 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 SCN1AP35498 2009 aa13.27□□□□□ -0.29
TRPM1-210ENST00000559179 OTOL1A6NHN0 477 aaPredicted RBP13.26□□□□□ -0.29
TRPM1-210ENST00000559179 SOBPA7XYQ1 873 aa13.26□□□□□ -0.29
TRPM1-210ENST00000559179 SPTBN2O15020 2390 aa13.26□□□□□ -0.29
TRPM1-210ENST00000559179 DCLK1O15075 740 aa13.26□□□□□ -0.29
TRPM1-210ENST00000559179 KCNK5O95279 499 aa13.26□□□□□ -0.29
TRPM1-210ENST00000559179 CAVIN2O95810 425 aa13.26□□□□□ -0.29
TRPM1-210ENST00000559179 BMP15O95972 392 aa13.26□□□□□ -0.29
TRPM1-210ENST00000559179 HMGA1P17096 107 aaKnown RBP13.26□□□□□ -0.29
TRPM1-210ENST00000559179 DDIT3P35638 169 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms