RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 MYLPFQ96A32 169 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 ERGIC2Q96RQ1 377 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 MED10Q9BTT4 135 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 APOL5Q9BWW9 433 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 ZCWPW1Q9H0M4 648 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 GANQ9H2C0 597 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 RXFP1Q9HBX9 757 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 FNIP2Q9P278 1114 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 BARX2Q9UMQ3 279 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-208ENST00000558970 BACE2Q9Y5Z0 518 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 HCFC2Q9Y5Z7 792 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 IRAK3Q9Y616 596 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 FAM170AA1A519 330 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 CLDN5O00501 218 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 TBC1D4O60343 1298 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 SOAT2O75908 522 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 NOL4O94818 638 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 CD19P15391 556 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 PTPN1P18031 435 aaKnown RBP13.24□□□□□ -0.29
GABPB1-208ENST00000558970 ADORA2BP29275 332 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 CLCN4P51793 760 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 ADCY1Q08828 1119 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 INCA1Q0VD86 236 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 DRAP1Q14919 205 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-208ENST00000558970 DUSP6Q16828 381 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 SLC8B1Q6J4K2 584 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 CACNA2D4Q7Z3S7 1137 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 DCP1BQ8IZD4 617 aaKnown RBP13.24□□□□□ -0.29
GABPB1-208ENST00000558970 TTC9BQ8N6N2 239 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 ATAD1Q8NBU5 361 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 RBBP8NLQ8NC74 664 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-208ENST00000558970 STKLD1Q8NE28 680 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 VN1R2Q8NFZ6 395 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 CPLX3Q8WVH0 158 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 HEXIM2Q96MH2 286 aaKnown RBP13.24□□□□□ -0.29
GABPB1-208ENST00000558970 SEPT5Q99719 369 aaPredicted RBP13.24□□□□□ -0.29
GABPB1-208ENST00000558970 ACBD6Q9BR61 282 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 NT5C1AQ9BXI3 368 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 CYP4F11Q9HBI6 524 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 ACP6Q9NPH0 428 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 MAN1C1Q9NR34 630 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 CLDND1Q9NY35 253 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 CDH9Q9ULB4 789 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
GABPB1-208ENST00000558970 PATJQ8NI35 1801 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 MTMR11A4FU01 709 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 RNF225M0QZC1 329 aaPredicted RBP13.23□□□□□ -0.29
GABPB1-208ENST00000558970 PRRG1O14668 218 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 ACO1P21399 889 aaKnown RBP13.23□□□□□ -0.29
GABPB1-208ENST00000558970 ELF1P32519 619 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 RAD23BP54727 409 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 ARID5AQ03989 594 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 RAB33AQ14088 237 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 SPATA2LQ8IUW3 424 aaPredicted RBP13.23□□□□□ -0.29
GABPB1-208ENST00000558970 UBR7Q8N806 425 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 C12orf76Q8N812 135 aaPredicted RBP13.23□□□□□ -0.29
GABPB1-208ENST00000558970 SLC4A11Q8NBS3 891 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 SLC7A14Q8TBB6 771 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 JAKMIP2Q96AA8 810 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 PCED1BQ96HM7 432 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 TMEM176AQ96HP8 235 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 TNIP3Q96KP6 325 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 SPAG5Q96R06 1193 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 CRISPLD1Q9H336 500 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 PLCB1Q9NQ66 1216 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 LMCD1Q9NZU5 365 aa13.23□□□□□ -0.29
GABPB1-208ENST00000558970 GREB1Q4ZG55 1949 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 GOLGA6L3A6NEY3 463 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 FOXN3O00409 490 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-208ENST00000558970 CYP26A1O43174 497 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 GFPT2O94808 682 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 SEC24AO95486 1093 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 VNN2O95498 520 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 GLP2RO95838 553 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 BDNFP23560 247 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 CYP2F1P24903 491 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 BRD2P25440 801 aaKnown RBP13.22□□□□□ -0.29
GABPB1-208ENST00000558970 GPR15P49685 360 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 DUSP4Q13115 394 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 GPR17Q13304 367 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 CLUL1Q15846 466 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 MGAT5BQ3V5L5 792 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 SDHAF4Q5VUM1 108 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 SARM1Q6SZW1 724 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 ENOSF1Q7L5Y1 443 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 UNC93AQ86WB7 457 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 KREMEN2Q8NCW0 462 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 ZNF461Q8TAF7 563 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 FEZF2Q8TBJ5 459 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 MYCBPAPQ8TBZ2 947 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 SPATA18Q8TC71 538 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 SLC2A14Q8TDB8 520 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 GPR152Q8TDT2 470 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 PKMYT1Q99640 499 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 B3GNT5Q9BYG0 378 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 ZNF518BQ9C0D4 1074 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 PCDHB5Q9Y5E4 795 aa13.22□□□□□ -0.29
GABPB1-208ENST00000558970 A0A1W2PQC6 194 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 F8VZ95 297 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms