RNA–Protein interactions for RNA: ENST00000558541.5

CPNE6-207, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-207ENST00000558541 ERLIN2O94905 339 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 TPM2P07951 284 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 PTPN2P17706 415 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 FCARP24071 287 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 HOXA11P31270 313 aaPredicted RBP14.66□□□□□ -0.06
CPNE6-207ENST00000558541 OR1D2P34982 312 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 STX17P56962 302 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 COL28A1Q2UY09 1125 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 UAP1L1Q3KQV9 507 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 ZCWPW2Q504Y3 356 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 DGKKQ5KSL6 1271 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 CDKAL1Q5VV42 579 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 POTEHQ6S545 545 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 VITQ6UXI7 678 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 SLC9A9Q8IVB4 645 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 ZC3H3Q8IXZ2 948 aaKnown RBP14.66□□□□□ -0.06
CPNE6-207ENST00000558541 YAF2Q8IY57 180 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 TMEM161BQ8NDZ6 487 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 DEFB124Q8NES8 71 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 LNX1Q8TBB1 728 aaPredicted RBP14.66□□□□□ -0.06
CPNE6-207ENST00000558541 PIK3R5Q8WYR1 880 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 CORO1BQ9BR76 489 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 SRRTQ9BXP5 876 aaKnown RBP14.66□□□□□ -0.06
CPNE6-207ENST00000558541 NFKBIZQ9BYH8 718 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 TRIM6Q9C030 488 aaPredicted RBP14.66□□□□□ -0.06
CPNE6-207ENST00000558541 TRPV5Q9NQA5 729 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 CACNG4Q9UBN1 327 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 KLK13Q9UKR3 277 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 MSRB2Q9Y3D2 182 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 CACNA1EQ15878 2313 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 ABCA7Q8IZY2 2146 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 ARID2Q68CP9 1835 aa14.66□□□□□ -0.06
CPNE6-207ENST00000558541 THADAQ6YHU6 1953 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 SHROOM3Q8TF72 1996 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 SLC38A8A6NNN8 435 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 K7ENM7 598 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 KIAA0391O15091 583 aaKnown RBP14.65□□□□□ -0.06
CPNE6-207ENST00000558541 CETN3O15182 167 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 PRPF6O94906 941 aaKnown RBP14.65□□□□□ -0.06
CPNE6-207ENST00000558541 LRG1P02750 347 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 POU2F2P09086 479 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 CSRP1P21291 193 aaKnown RBP14.65□□□□□ -0.06
CPNE6-207ENST00000558541 NMT1P30419 496 aaKnown RBP14.65□□□□□ -0.06
CPNE6-207ENST00000558541 HOXA6P31267 233 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 VIPR2P41587 438 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 SOX9P48436 509 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 FILIP1LQ4L180 1135 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 SRGAP1Q7Z6B7 1085 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 C12orf56Q8IXR9 622 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 HACE1Q8IYU2 909 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 SYCP3Q8IZU3 236 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 DEPTORQ8TB45 409 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 MRFAP1L1Q96HT8 127 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 DUSP9Q99956 384 aaKnown RBP14.65□□□□□ -0.06
CPNE6-207ENST00000558541 TRIM5Q9C035 493 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 HSD3B7Q9H2F3 369 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 MINDY3Q9H8M7 445 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 GPRC5CQ9NQ84 441 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 ARHGAP28Q9P2N2 729 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 LIMA1Q9UHB6 759 aaKnown RBP14.65□□□□□ -0.06
CPNE6-207ENST00000558541 GPSM3Q9Y4H4 160 aa14.65□□□□□ -0.06
CPNE6-207ENST00000558541 EXTL3O43909 919 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 SERPINC1P01008 464 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 GLRA2P23416 452 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 AKAP5P24588 427 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 CASP5P51878 434 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 FANCCQ00597 558 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 CCDC173Q0VFZ6 552 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 STRN3Q13033 797 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 PCBP1Q15365 356 aaKnown RBP eCLIP14.64□□□□□ -0.07
CPNE6-207ENST00000558541 TCP11X2Q5H9J9 407 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 PDXDC1Q6P996 788 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 C1orf228Q6PIY5 440 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
CPNE6-207ENST00000558541 ZBTB8OSQ8IWT0 167 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 TTC8Q8TAM2 541 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 DEPDC1BQ8WUY9 529 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 PRPF31Q8WWY3 499 aaKnown RBP14.64□□□□□ -0.07
CPNE6-207ENST00000558541 TMEM143Q96AN5 459 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 TCEAL4Q96EI5 215 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 ASB16Q96NS5 453 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 TMEM9BQ9NQ34 198 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 KLK14Q9P0G3 267 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 PARP2Q9UGN5 583 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 TBX20Q9UMR3 447 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 SLC8A2Q9UPR5 921 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 GIT1Q9Y2X7 761 aa14.64□□□□□ -0.07
CPNE6-207ENST00000558541 SMG1Q96Q15 3661 aaKnown RBP14.63□□□□□ -0.07
CPNE6-207ENST00000558541 K7ERI5 159 aa14.63□□□□□ -0.07
CPNE6-207ENST00000558541 NRG2O14511 850 aaPredicted RBP14.63□□□□□ -0.07
CPNE6-207ENST00000558541 ZNF197O14709 1029 aa14.63□□□□□ -0.07
CPNE6-207ENST00000558541 SLC16A4O15374 487 aa14.63□□□□□ -0.07
CPNE6-207ENST00000558541 CDC25BP30305 580 aa14.63□□□□□ -0.07
CPNE6-207ENST00000558541 HOXD13P35453 343 aa14.63□□□□□ -0.07
CPNE6-207ENST00000558541 PMS1P54277 932 aaKnown RBP14.63□□□□□ -0.07
CPNE6-207ENST00000558541 MARSP56192 900 aaKnown RBP14.63□□□□□ -0.07
CPNE6-207ENST00000558541 UBASH3AP57075 661 aa14.63□□□□□ -0.07
CPNE6-207ENST00000558541 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
CPNE6-207ENST00000558541 PPP2R3AQ06190 1150 aa14.63□□□□□ -0.07
CPNE6-207ENST00000558541 NCBP1Q09161 790 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms