RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 TAS1R2Q8TE23 839 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 GDPD5Q8WTR4 605 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 POF1BQ8WVV4 589 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 HPDLQ96IR7 371 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 ZNF560Q96MR9 790 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 ANP32EQ9BTT0 268 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 PI4K2AQ9BTU6 479 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 C11orf84Q9BUA3 381 aaPredicted RBP12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 PLVAPQ9BX97 442 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 GPR62Q9BZJ7 368 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 HSD3B7Q9H2F3 369 aa12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 PUF60Q9UHX1 559 aaKnown RBP12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.91□□□□□ -0.34
HMGB1P8-201ENST00000558211 C5orf67F2Z3F1 127 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 GRM6O15303 877 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 LRRN2O75325 713 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 TPM2P07951 284 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 LILRA4P59901 499 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 MYO1EQ12965 1108 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 KRT31Q15323 416 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 SV2CQ496J9 727 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 VWA3BQ502W6 1294 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 TIGD5Q53EQ6 642 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 LCE2AQ5TA79 106 aaPredicted RBP12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 LCE2CQ5TA81 110 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 FAM171A1Q5VUB5 890 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 C15orf39Q6ZRI6 1047 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 VPS52Q8N1B4 723 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 CXorf38Q8TB03 319 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 MICAL1Q8TDZ2 1067 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 B3GALT6Q96L58 329 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 TTYH1Q9H313 450 aaPredicted RBP12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 PRDM12Q9H4Q4 367 aa12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 CUEDC1Q9NWM3 386 aaPredicted RBP12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 TIMM13Q9Y5L4 95 aaPredicted RBP12.9□□□□□ -0.34
HMGB1P8-201ENST00000558211 SF3B1O75533 1304 aaKnown RBP eCLIP12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 KPNA7A9QM74 516 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 H3BNC9 293 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 TMEM189-UBE2V1I3L0A0 370 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 C2CD2LO14523 706 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 TRAPPC3O43617 180 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 N4BP1O75113 896 aaKnown RBP12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 ZNF18P17022 549 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 DNAJB1P25685 340 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 WEE1P30291 646 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 PNPLA4P41247 253 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 COPB1P53618 953 aaKnown RBP12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 PSMA6P60900 246 aaKnown RBP12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 PLCB3Q01970 1234 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 CETN1Q12798 172 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 LRMPQ12912 555 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 GRIN2CQ14957 1233 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 ZNF699Q32M78 642 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 SPOPLQ6IQ16 392 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 KIAA1841Q6NSI8 718 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 Q7L0L9 218 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 TMC7Q7Z402 723 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 DDX53Q86TM3 631 aaKnown RBP12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 LRRC52Q8N7C0 313 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 FBXL13Q8NEE6 735 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 AUTS2Q8WXX7 1259 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 NANOS1Q8WY41 292 aaKnown RBP12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 SEMA4DQ92854 862 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 SENP8Q96LD8 212 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 MMS19Q96T76 1030 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 HINFPQ9BQA5 517 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 CRACR2AQ9BSW2 395 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 VN1R3Q9BXE9 311 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 NDST4Q9H3R1 872 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 RAB20Q9NX57 234 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 LIMA1Q9UHB6 759 aaKnown RBP12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 POLIQ9UNA4 740 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 SNX9Q9Y5X1 595 aa12.89□□□□□ -0.35
HMGB1P8-201ENST00000558211 CYB561D2O14569 222 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 SERPINC1P01008 464 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 F11P03951 625 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 SOD2P04179 222 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 VSIG8P0DPA2 414 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 TKTP29401 623 aaKnown RBP12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 NOS2P35228 1153 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 ERVFC1P60507 584 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 TNNC1P63316 161 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 ELAVL2Q12926 359 aaKnown RBP12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 SGSM1Q2NKQ1 1148 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 WDR72Q3MJ13 1102 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 ZNF667Q5HYK9 610 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 MIIPQ5JXC2 388 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 TMCO4Q5TGY1 634 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 PLPP4Q5VZY2 271 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 SCARA5Q6ZMJ2 495 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 GAS2L3Q86XJ1 694 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 SUSD3Q96L08 255 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 IMPG2Q9BZV3 1241 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 RBSNQ9H1K0 784 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 ENTPD7Q9NQZ7 604 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 VWA8A3KMH1 1905 aa12.88□□□□□ -0.35
HMGB1P8-201ENST00000558211 MYO7AQ13402 2215 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 TMEM265A0A087WTH1 108 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms