RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 ASPHQ12797 758 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 CTTNQ14247 550 aaKnown RBP11.45□□□□□ -0.58
USP3-206ENST00000558157 RASA2Q15283 850 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 CFAP157Q5JU67 520 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 MAP3K21Q5TCX8 1036 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 CCDC62Q6P9F0 684 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 RIOX2Q8IUF8 465 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 OLIG1Q8TAK6 271 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 CYP2W1Q8TAV3 490 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 DTX3LQ8TDB6 740 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 GRK7Q8WTQ7 553 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 SLC35B4Q969S0 331 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 MPHOSPH6Q99547 160 aaKnown RBP11.45□□□□□ -0.58
USP3-206ENST00000558157 PLVAPQ9BX97 442 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 STK33Q9BYT3 514 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 OSBPL8Q9BZF1 889 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 RMI1Q9H9A7 625 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 MAP3K20Q9NYL2 800 aaKnown RBP11.45□□□□□ -0.58
USP3-206ENST00000558157 NINJ2Q9NZG7 142 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 BARX2Q9UMQ3 279 aaPredicted RBP11.45□□□□□ -0.58
USP3-206ENST00000558157 FKBP6O75344 327 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 NR2F2P24468 414 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 ZNF157P51786 506 aaPredicted RBP11.45□□□□□ -0.58
USP3-206ENST00000558157 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.45□□□□□ -0.58
USP3-206ENST00000558157 OTOAQ7RTW8 1153 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 SAPCD2Q86UD0 394 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.45□□□□□ -0.588e-6■□□□□ 9.8
USP3-206ENST00000558157 CHST13Q8NET6 341 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 ETNPPLQ8TBG4 499 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 SNX29Q8TEQ0 813 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 SCFD1Q8WVM8 642 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 MAF1Q9H063 256 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 SLCO1B3Q9NPD5 702 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 RBPJLQ9UBG7 517 aa11.45□□□□□ -0.58
USP3-206ENST00000558157 KDM3AQ9Y4C1 1321 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 IGLV3-22A0A075B6J6 115 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 RBM47A0AV96 593 aaKnown RBP11.44□□□□□ -0.58
USP3-206ENST00000558157 NDC80O14777 642 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 MARCH6O60337 910 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 MTA2O94776 668 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 SPATA31D3P0C874 917 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 RARBP10826 455 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 BCRP11274 1271 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 EIF2AK2P19525 551 aaKnown RBP11.44□□□□□ -0.58
USP3-206ENST00000558157 ACADVLP49748 655 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 CDC16Q13042 620 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 MED21Q13503 144 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 DCTN2Q13561 401 aaKnown RBP11.44□□□□□ -0.58
USP3-206ENST00000558157 THOC5Q13769 683 aaKnown RBP11.44□□□□□ -0.58
USP3-206ENST00000558157 PTK6Q13882 451 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 KCTD19Q17RG1 926 aaPredicted RBP11.44□□□□□ -0.58
USP3-206ENST00000558157 CCDC92Q53HC0 331 aaPredicted RBP11.44□□□□□ -0.58
USP3-206ENST00000558157 HYIQ5T013 277 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 TMCO4Q5TGY1 634 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 AAGABQ6PD74 315 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 SPATA31D4Q6ZUB0 917 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 DNAAF5Q86Y56 855 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 DYDC2Q96IM9 177 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 R3HDMLQ9H3Y0 253 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.44□□□□□ -0.582e-22■■■■■ 279.5
USP3-206ENST00000558157 SLC45A1Q9Y2W3 748 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 MTO1Q9Y2Z2 717 aaKnown RBP11.44□□□□□ -0.58
USP3-206ENST00000558157 POTEMA6NI47 508 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 OPHN1O60890 802 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 CIB2O75838 187 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 ETS2P15036 469 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 RAB15P59190 212 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 SIX1Q15475 284 aaPredicted RBP11.44□□□□□ -0.58
USP3-206ENST00000558157 GLYCTKQ8IVS8 523 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 MAP7D3Q8IWC1 876 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 ZDHHC14Q8IZN3 488 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 SYT2Q8N9I0 419 aaPredicted RBP11.44□□□□□ -0.58
USP3-206ENST00000558157 RMDN3Q96TC7 470 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 PXMP2Q9NR77 195 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 TAS2R1Q9NYW7 299 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 GCNT4Q9P109 453 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 PTPN22Q9Y2R2 807 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 RABGAP1Q9Y3P9 1069 aa11.44□□□□□ -0.58
USP3-206ENST00000558157 IGSF9BQ9UPX0 1349 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 A6NJR5 290 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 MSH4O15457 936 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 MAFGO15525 162 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 CALUO43852 315 aaPredicted RBP11.43□□□□□ -0.58
USP3-206ENST00000558157 RNASEH1O60930 286 aaKnown RBP11.43□□□□□ -0.58
USP3-206ENST00000558157 TGDSO95455 350 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 ESRRAP11474 423 aaPredicted RBP11.43□□□□□ -0.58
USP3-206ENST00000558157 PGM1P36871 562 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 CETN2P41208 172 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 KRT17Q04695 432 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 PGM5Q15124 567 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 Q3C1V9 767 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 RGMBQ6NW40 437 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 TMPRSS6Q8IU80 811 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 CCDC110Q8TBZ0 833 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 ZNF75CPQ92670 426 aaPredicted RBP11.43□□□□□ -0.58
USP3-206ENST00000558157 CFAP57Q96MR6 1250 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 PTPN18Q99952 460 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 C17orf75Q9HAS0 396 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 ASIC3Q9UHC3 531 aa11.43□□□□□ -0.58
USP3-206ENST00000558157 TBK1Q9UHD2 729 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms