RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ITGB8P26012 769 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 HOXD10P28358 340 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 MCAMP43121 646 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 PSMC4P43686 418 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 TNNT2P45379 298 aaPredicted RBP7.29□□□□□ -1.24
RTF1-204ENST00000558117 GZMKP49863 264 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 MALLQ13021 153 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 SHHQ15465 462 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 HLFQ16534 295 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 GJC2Q5T442 439 aaPredicted RBP7.29□□□□□ -1.24
RTF1-204ENST00000558117 APBB1IPQ7Z5R6 666 aaPredicted RBP7.29□□□□□ -1.24
RTF1-204ENST00000558117 ZNF480Q8WV37 535 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 ST8SIA2Q92186 375 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 ZNF341Q9BYN7 854 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 NYXQ9GZU5 481 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 HDAC5Q9UQL6 1122 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 TCF20Q9UGU0 1960 aaKnown RBP7.29□□□□□ -1.24
RTF1-204ENST00000558117 HEG1Q9ULI3 1381 aa7.29□□□□□ -1.24
RTF1-204ENST00000558117 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 PI4K2BG5E9Z4 385 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 ADCY6O43306 1168 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 HOXA3O43365 443 aaPredicted RBP7.28□□□□□ -1.24
RTF1-204ENST00000558117 BBOX1O75936 387 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 PIP4K2AP48426 406 aaPredicted RBP7.28□□□□□ -1.24
RTF1-204ENST00000558117 EXOSC10Q01780 885 aaKnown RBP7.28□□□□□ -1.24
RTF1-204ENST00000558117 RRP1BQ14684 758 aaKnown RBP7.28□□□□□ -1.24
RTF1-204ENST00000558117 NOMO1Q15155 1222 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 C9orf50Q5SZB4 431 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 LCE5AQ5TCM9 118 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 PDZD4Q76G19 769 aaPredicted RBP7.28□□□□□ -1.24
RTF1-204ENST00000558117 AGBL3Q8NEM8 1001 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 REPS2Q8NFH8 660 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 OR2I1PQ8NGU4 316 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 CPPED1Q9BRF8 314 aaPredicted RBP7.28□□□□□ -1.24
RTF1-204ENST00000558117 ADI1Q9BV57 179 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 GPR87Q9BY21 358 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 C11orf49Q9H6J7 331 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 RBM12Q9NTZ6 932 aaKnown RBP7.28□□□□□ -1.24
RTF1-204ENST00000558117 DNM3Q9UQ16 869 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 UBR2Q8IWV8 1755 aa7.28□□□□□ -1.24
RTF1-204ENST00000558117 PFASO15067 1338 aa7.27□□□□□ -1.24
RTF1-204ENST00000558117 GPR179Q6PRD1 2367 aa7.27□□□□□ -1.24
RTF1-204ENST00000558117 ACACBO00763 2458 aa7.27□□□□□ -1.24
RTF1-204ENST00000558117 GOLGA6L6A8MZA4 724 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 WNT10BO00744 389 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 NDUFS2O75306 463 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 AMHP03971 560 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 PDGFRBP09619 1106 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 PRKCZQ05513 592 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 MRPL49Q13405 166 aaKnown RBP7.27□□□□□ -1.25
RTF1-204ENST00000558117 SEPT2Q15019 361 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 MST1LQ2TV78 715 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 C17orf99Q6UX52 265 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 Q6ZRM9 215 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 MDGA1Q8NFP4 955 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 MDM1Q8TC05 714 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 NRG4Q8WWG1 115 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 HOXB13Q92826 284 aaPredicted RBP7.27□□□□□ -1.25
RTF1-204ENST00000558117 TEKT5Q96M29 485 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 PLEKHG4BQ96PX9 1271 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 PARPBPQ9NWS1 579 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 POLKQ9UBT6 870 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 TRPS1Q9UHF7 1281 aa7.27□□□□□ -1.25
RTF1-204ENST00000558117 CHD9Q3L8U1 2897 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 CCL15-CCL14A0A0B4J2E2 113 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 C6P13671 934 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 TACR2P21452 398 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 ZXDAP98168 799 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 APBA1Q02410 837 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 PTH1RQ03431 593 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 FOXE3Q13461 319 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 CCL15Q16663 113 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 DCAF17Q5H9S7 520 aaPredicted RBP7.26□□□□□ -1.25
RTF1-204ENST00000558117 FAM83AQ86UY5 434 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 TMPRSS6Q8IU80 811 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 FBXO18Q8NFZ0 1043 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 IL17DQ8TAD2 202 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 SSH1Q8WYL5 1049 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 PGBD4Q96DM1 585 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 ZNF747Q9BV97 191 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 SLC13A1Q9BZW2 595 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 TYW1Q9NV66 732 aaKnown RBP7.26□□□□□ -1.25
RTF1-204ENST00000558117 SPEF1Q9Y4P9 236 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 REV3LO60673 3130 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 MAST4O15021 2626 aa7.26□□□□□ -1.25
RTF1-204ENST00000558117 FLNBO75369 2602 aaKnown RBP7.26□□□□□ -1.25
RTF1-204ENST00000558117 DNAH12Q6ZR08 3092 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 ROCK2O75116 1388 aaKnown RBP7.25□□□□□ -1.25
RTF1-204ENST00000558117 GASTP01350 101 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 CCND1P24385 295 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 CRHR1P34998 444 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 SCNN1GP51170 649 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 KRT85P78386 507 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 TFF2Q03403 129 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 PRAMEF14Q5SWL7 426 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 USP51Q70EK9 711 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 XYLT1Q86Y38 959 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 TTC5Q8N0Z6 440 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 CEP95Q96GE4 821 aa7.25□□□□□ -1.25
RTF1-204ENST00000558117 LBHD1Q9BQE6 289 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms