RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 CYFIP2Q96F07 1278 aa10.88□□□□□ -0.67
GABRB3-212ENST00000557641 SUSD3Q96L08 255 aa10.88□□□□□ -0.67
GABRB3-212ENST00000557641 MRPL45Q9BRJ2 306 aaKnown RBP10.88□□□□□ -0.67
GABRB3-212ENST00000557641 COLEC11Q9BWP8 271 aa10.88□□□□□ -0.67
GABRB3-212ENST00000557641 TANC1Q9C0D5 1861 aa10.88□□□□□ -0.67
GABRB3-212ENST00000557641 AVENQ9NQS1 362 aaPredicted RBP10.88□□□□□ -0.67
GABRB3-212ENST00000557641 LCMT1Q9UIC8 334 aa10.88□□□□□ -0.67
GABRB3-212ENST00000557641 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.88□□□□□ -0.67
GABRB3-212ENST00000557641 PAXBP1Q9Y5B6 917 aa10.88□□□□□ -0.67
GABRB3-212ENST00000557641 NCANO14594 1321 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 TMCO5BA8MYB1 307 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 O00370 1275 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 GPR37O15354 613 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 DGKIO75912 1065 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 DDHD2O94830 711 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 CYP1A2P05177 515 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 CALB1P05937 261 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 BRD2P25440 801 aaKnown RBP10.87□□□□□ -0.67
GABRB3-212ENST00000557641 CASQ1P31415 396 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 OR1G1P47890 313 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 NAP1L1P55209 391 aaKnown RBP10.87□□□□□ -0.67
GABRB3-212ENST00000557641 ELAVL2Q12926 359 aaKnown RBP10.87□□□□□ -0.67
GABRB3-212ENST00000557641 TUBB2AQ13885 445 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 TIGD5Q53EQ6 642 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 ZNF569Q5MCW4 686 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 NAA35Q5VZE5 725 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 WSCD1Q658N2 575 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.87□□□□□ -0.67
GABRB3-212ENST00000557641 PALB2Q86YC2 1186 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 ZNF280BQ86YH2 543 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 MCOLN2Q8IZK6 566 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 THEM5Q8N1Q8 247 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 C3orf58Q8NDZ4 430 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 STK32AQ8WU08 396 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 TFAP2BQ92481 460 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 VWCEQ96DN2 955 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 TWNKQ96RR1 684 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 TUBB2BQ9BVA1 445 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 PACSIN1Q9BY11 444 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 KRTAP3-2Q9BYR7 98 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 NRDE2Q9H7Z3 1164 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 TAS2R14Q9NYV8 317 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 UVRAGQ9P2Y5 699 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 HESX1Q9UBX0 185 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 CDH9Q9ULB4 789 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 STRIP2Q9ULQ0 834 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 FAN1Q9Y2M0 1017 aa10.87□□□□□ -0.67
GABRB3-212ENST00000557641 A0A0U1RQJ8 604 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 MACROD2A1Z1Q3 448 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 TBKBP1A7MCY6 615 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 SYN3O14994 580 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 TADA2AO75478 443 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 MTA2O94776 668 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 FGBP02675 491 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 MMP8P22894 467 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 ITGB8P26012 769 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 SLC8A3P57103 927 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 FPGSQ05932 587 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 MAPRE1Q15691 268 aaKnown RBP10.86□□□□□ -0.67
GABRB3-212ENST00000557641 CD300LGQ6UXG3 332 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 SYT10Q6XYQ8 523 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.86□□□□□ -0.67
GABRB3-212ENST00000557641 MON1BQ7L1V2 547 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 ACOT1Q86TX2 421 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 ERICH1Q86X53 443 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 SYCE1Q8N0S2 351 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 ATRIPQ8WXE1 791 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 ZNF653Q96CK0 615 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 ZSWIM1Q9BR11 485 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 ACBD6Q9BR61 282 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 OXCT2Q9BYC2 517 aaPredicted RBP10.86□□□□□ -0.67
GABRB3-212ENST00000557641 THAP2Q9H0W7 228 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 MRPL47Q9HD33 250 aaKnown RBP10.86□□□□□ -0.67
GABRB3-212ENST00000557641 DDX43Q9NXZ2 648 aaKnown RBP10.86□□□□□ -0.67
GABRB3-212ENST00000557641 ADAM22Q9P0K1 906 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 WDR35Q9P2L0 1181 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 TRIM10Q9UDY6 481 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 HMGXB4Q9UGU5 601 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 DNAI1Q9UI46 699 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 JRKLQ9Y4A0 524 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 PCDHGC5Q9Y5F6 944 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 SCINQ9Y6U3 715 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 DUSP10Q9Y6W6 482 aa10.86□□□□□ -0.67
GABRB3-212ENST00000557641 PDCD11Q14690 1871 aaKnown RBP10.86□□□□□ -0.67
GABRB3-212ENST00000557641 CTAGE9A4FU28 777 aa10.85□□□□□ -0.67
GABRB3-212ENST00000557641 NRP1O14786 923 aa10.85□□□□□ -0.67
GABRB3-212ENST00000557641 MICAL2O94851 1124 aa10.85□□□□□ -0.67
GABRB3-212ENST00000557641 ABL1P00519 1130 aa10.85□□□□□ -0.67
GABRB3-212ENST00000557641 CALCAP01258 141 aa10.85□□□□□ -0.67
GABRB3-212ENST00000557641 PDGFRBP09619 1106 aa10.85□□□□□ -0.67
GABRB3-212ENST00000557641 PTPN1P18031 435 aaKnown RBP10.85□□□□□ -0.67
GABRB3-212ENST00000557641 ABCB4P21439 1286 aa10.85□□□□□ -0.67
GABRB3-212ENST00000557641 GPD2P43304 727 aa10.85□□□□□ -0.67
GABRB3-212ENST00000557641 NOP2P46087 812 aaKnown RBP10.85□□□□□ -0.67
GABRB3-212ENST00000557641 GSCP56915 257 aaPredicted RBP10.85□□□□□ -0.67
GABRB3-212ENST00000557641 WDR5P61964 334 aaKnown RBP10.85□□□□□ -0.67
GABRB3-212ENST00000557641 LSM11P83369 360 aaKnown RBP eCLIP10.85□□□□□ -0.67
GABRB3-212ENST00000557641 TAP1Q03518 808 aa10.85□□□□□ -0.67
GABRB3-212ENST00000557641 OVOS1Q6IE37 1185 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms