RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 C11orf70Q9BRQ4 267 aa15.36■□□□□ 0.05
ARHGEF40-208ENST00000557498 AVENQ9NQS1 362 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF40-208ENST00000557498 FAM49BQ9NUQ9 324 aa15.36■□□□□ 0.05
ARHGEF40-208ENST00000557498 DDX43Q9NXZ2 648 aaKnown RBP15.36■□□□□ 0.05
ARHGEF40-208ENST00000557498 CNOT8Q9UFF9 292 aaKnown RBP15.36■□□□□ 0.05
ARHGEF40-208ENST00000557498 TSPAN16Q9UKR8 245 aa15.36■□□□□ 0.05
ARHGEF40-208ENST00000557498 PCDHB8Q9UN66 801 aa15.36■□□□□ 0.05
ARHGEF40-208ENST00000557498 PRG3Q9Y2Y8 225 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF40-208ENST00000557498 F8W810 466 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 NRP1O14786 923 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 UPP2O95045 317 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 MMP8P22894 467 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 NOP2P46087 812 aaKnown RBP15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 SLC11A1P49279 550 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 DEFB103AP81534 67 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 PTP4A2Q12974 167 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 PPP1R26Q5T8A7 1209 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 MMS22LQ6ZRQ5 1243 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 WDTC1Q8N5D0 677 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 B3GALNT2Q8NCR0 500 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 TPCN2Q8NHX9 752 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 TOP1MTQ969P6 601 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 VCPIP1Q96JH7 1222 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 SYT15Q9BQS2 421 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 COLEC11Q9BWP8 271 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 ADAM22Q9P0K1 906 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 HCSTQ9UBK5 93 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 PCDHGC5Q9Y5F6 944 aa15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 TIMM13Q9Y5L4 95 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF40-208ENST00000557498 GRID2IPA4D2P6 1211 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 ATMINO43313 823 aaPredicted RBP15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 MTA2O94776 668 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 CALB1P05937 261 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 PTPN1P18031 435 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 ACAT1P24752 427 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 HADHBP55084 474 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 PSMC1P62191 440 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 FPGSQ05932 587 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 LIN9Q5TKA1 542 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 SLC35G2Q8TBE7 412 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 BADQ92934 168 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 CALR3Q96L12 384 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 NAPGQ99747 312 aaPredicted RBP15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 LPIN3Q9BQK8 851 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 OSGEPQ9NPF4 335 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 MARCH5Q9NX47 278 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 CTTNBP2NLQ9P2B4 639 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 PCDH10Q9P2E7 1040 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 HESX1Q9UBX0 185 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 CDH9Q9ULB4 789 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 FAN1Q9Y2M0 1017 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 PTPRSQ13332 1948 aa15.34■□□□□ 0.05
ARHGEF40-208ENST00000557498 CTAGE9A4FU28 777 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 TRAPPC3O43617 180 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 TADA2AO75478 443 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 PALMO75781 387 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 ALDH2P05091 517 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 GALTP07902 379 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 SETSIPP0DME0 302 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 CCDC130P13994 396 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 RRM1P23921 792 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 PCSK1P29120 753 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 GPD2P43304 727 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 PTPN20Q4JDL3 420 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 PKDCCQ504Y2 493 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 KIAA0319Q5VV43 1072 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 OVOS1Q6IE37 1185 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 TTC30AQ86WT1 665 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 ERICH1Q86X53 443 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 MSANTD4Q8NCY6 345 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 UBA3Q8TBC4 463 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 RTP3Q9BQQ7 232 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 HTATIP2Q9BUP3 242 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 NUP85Q9BW27 656 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 RC3H2Q9HBD1 1191 aaKnown RBP15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 CRTAC1Q9NQ79 661 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 UVRAGQ9P2Y5 699 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 CYTH4Q9UIA0 394 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 ADAM28Q9UKQ2 775 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 COG5Q9UP83 839 aa15.33■□□□□ 0.04
ARHGEF40-208ENST00000557498 SYN3O14994 580 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 ATP2C2O75185 946 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 ADORA2BP29275 332 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 TKTP29401 623 aaKnown RBP15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 BCAT1P54687 386 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 BCAR1P56945 870 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 PDCLQ13371 301 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 C2CD6Q53TS8 623 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 MDH1BQ5I0G3 518 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 C16orf59Q7L2K0 433 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 OTOP2Q7RTS6 562 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 CMTR2Q8IYT2 770 aaKnown RBP15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 THEM5Q8N1Q8 247 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 LRRC57Q8N9N7 239 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 ANKRD52Q8NB46 1076 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 ZNF564Q8TBZ8 553 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 SLC2A14Q8TDB8 520 aa15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 ZNF689Q96CS4 500 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 HNRNPABQ99729 332 aaKnown RBP15.32■□□□□ 0.04
ARHGEF40-208ENST00000557498 ACBD6Q9BR61 282 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms