RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 PSMA2P25787 234 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 OTUD4Q01804 1114 aaKnown RBP18.66■□□□□ 0.58
XRCC3-218ENST00000557439 ZNF699Q32M78 642 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 HSDL1Q3SXM5 330 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 PPP1R15BQ5SWA1 713 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 EEF1DP3Q658K8 133 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 DPH6Q7L8W6 267 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 KLHL29Q96CT2 875 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 NLRP4Q96MN2 994 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 CFAP57Q96MR6 1250 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 KLF6Q99612 283 aaPredicted RBP18.66■□□□□ 0.58
XRCC3-218ENST00000557439 GGA3Q9NZ52 723 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 HMGXB4Q9UGU5 601 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 AGTPBP1Q9UPW5 1226 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 IGKV6D-21A0A0A0MT36 114 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 ASPAP45381 313 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 GPX6P59796 221 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 COPS2P61201 443 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 LAMTOR4Q0VGL1 99 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 BNIP1Q12981 228 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 PREPLQ4J6C6 727 aaPredicted RBP18.66■□□□□ 0.58
XRCC3-218ENST00000557439 FNBP1LQ5T0N5 605 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 CCDC91Q7Z6B0 441 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 NCAPG2Q86XI2 1143 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 RHPN2Q8IUC4 686 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 WDR49Q8IV35 697 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 STAMBPL1Q96FJ0 436 aa18.66■□□□□ 0.58
XRCC3-218ENST00000557439 ACO2Q99798 780 aaKnown RBP18.66■□□□□ 0.58
XRCC3-218ENST00000557439 MAK16Q9BXY0 300 aaKnown RBP18.66■□□□□ 0.58
XRCC3-218ENST00000557439 WDR91A4D1P6 747 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 GOLGA8RI6L899 631 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 ATP2A1O14983 1001 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 CST8O60676 142 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 TOM1L1O75674 476 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 PRKCBP05771 671 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 PGK2P07205 417 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 HOXC6P09630 235 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 MTFR1Q15390 333 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 WDR83Q9BRX9 315 aaKnown RBP18.65■□□□□ 0.58
XRCC3-218ENST00000557439 TMEM134Q9H6X4 195 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 HOXC10Q9NYD6 342 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 C3orf70A6NLC5 250 aaPredicted RBP18.65■□□□□ 0.58
XRCC3-218ENST00000557439 C19orf81C9J6K1 198 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 LRCH4O75427 683 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 ASMTLO95671 621 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 ICAM3P32942 547 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 MAP2K2P36507 400 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 TFDP1Q14186 410 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 RELL1Q8IUW5 271 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 TWNKQ96RR1 684 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 MRPL4Q9BYD3 311 aaKnown RBP18.65■□□□□ 0.58
XRCC3-218ENST00000557439 XYLT2Q9H1B5 865 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 NRBP2Q9NSY0 501 aa18.65■□□□□ 0.58
XRCC3-218ENST00000557439 CLUHO75153 1309 aa18.64■□□□□ 0.58
XRCC3-218ENST00000557439 ABLIM1O14639 778 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 MAFO75444 373 aaPredicted RBP18.64■□□□□ 0.57
XRCC3-218ENST00000557439 STAM2O75886 525 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 RPSAP08865 295 aaKnown RBP18.64■□□□□ 0.57
XRCC3-218ENST00000557439 CA4P22748 312 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 CTCFP49711 727 aaPredicted RBP18.64■□□□□ 0.57
XRCC3-218ENST00000557439 DUOXA2Q1HG44 320 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 TMEM132AQ24JP5 1023 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 CPXM1Q96SM3 734 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 CXCL8P10145 99 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 RPS12P25398 132 aaKnown RBP18.64■□□□□ 0.57
XRCC3-218ENST00000557439 LACTBP83111 547 aaPredicted RBP18.64■□□□□ 0.57
XRCC3-218ENST00000557439 IL9RQ01113 521 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 AGAP11Q8TF27 550 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 LRRN4Q8WUT4 740 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 COPS5Q92905 334 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 SDCBP2Q9H190 292 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 MINDY3Q9H8M7 445 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 METTL5Q9NRN9 209 aaKnown RBP18.64■□□□□ 0.57
XRCC3-218ENST00000557439 KLHL14Q9P2G3 628 aa18.64■□□□□ 0.57
XRCC3-218ENST00000557439 CPSF3Q9UKF6 684 aaKnown RBP18.64■□□□□ 0.57
XRCC3-218ENST00000557439 POLR2AP24928 1970 aaKnown RBP18.63■□□□□ 0.57
XRCC3-218ENST00000557439 INO80B-WBP1J3KQ70 363 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 OGTO15294 1046 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 KRT3P12035 628 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 SLC25A11Q02978 314 aaKnown RBP18.63■□□□□ 0.57
XRCC3-218ENST00000557439 LMNB2Q03252 620 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 SH3PXD2AQ5TCZ1 1133 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 UNC45BQ8IWX7 931 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 KIRREL3Q8IZU9 778 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 DENND1AQ8TEH3 1009 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 HSPH1Q92598 858 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 TMEM237Q96Q45 408 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 INO80BQ9C086 356 aaPredicted RBP18.63■□□□□ 0.57
XRCC3-218ENST00000557439 RXFP1Q9HBX9 757 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 ALG13Q9NP73 1137 aaKnown RBP18.63■□□□□ 0.57
XRCC3-218ENST00000557439 PHTF1Q9UMS5 762 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 SSC5DA1L4H1 1573 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 KAT6AQ92794 2004 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 ABHD2P08910 425 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 PSMC1P62191 440 aaKnown RBP18.63■□□□□ 0.57
XRCC3-218ENST00000557439 SGSM1Q2NKQ1 1148 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 WLSQ5T9L3 541 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 NPNTQ6UXI9 565 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 PPP1R21Q6ZMI0 780 aa18.63■□□□□ 0.57
XRCC3-218ENST00000557439 SLC35B2Q8TB61 432 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms