RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 SGMS1Q86VZ5 419 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 PQLC1Q8N2U9 271 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 ATP11CQ8NB49 1132 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 ST8SIA2Q92186 375 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 HTRA1Q92743 480 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 DVL3Q92997 716 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 LTV1Q96GA3 475 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 CLPTM1LQ96KA5 538 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 PTPN18Q99952 460 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 GDF15Q99988 308 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 FDXACB1Q9BRP7 624 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 SOX7Q9BT81 388 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 COLEC11Q9BWP8 271 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 MEGF9Q9H1U4 602 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 UNC45AQ9H3U1 944 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 SH3GLB2Q9NR46 395 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 CNNM1Q9NRU3 951 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 SACM1LQ9NTJ5 587 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 PPP4R1LQ9P1A2 415 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 CALCOCO1Q9P1Z2 691 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 KIF17Q9P2E2 1029 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 ABCF2Q9UG63 623 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 SRP68Q9UHB9 627 aaKnown RBP3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 FEM1BQ9UK73 627 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 PCDHA1Q9Y5I3 950 aa3.63□□□□□ -1.83
HMGB1P14-201ENST00000557424 FSD2A1L4K1 749 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 C2orf78A6NCI8 922 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 TSPY2A6NKD2 308 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 PATE3B3GLJ2 98 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 IRAK2O43187 625 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 DOK2O60496 412 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 ZNF623O75123 536 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 AHSGP02765 367 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 RPN1P04843 607 aaKnown RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 HLA-DOAP06340 250 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 GNAI3P08754 354 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 TSPY3P0CV98 308 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 TSPY8P0CW00 308 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 MTHFD1P11586 935 aaKnown RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 MYL4P12829 197 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 GYS1P13807 737 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 AKR1B1P15121 316 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 PTPN7P35236 360 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 MSX2P35548 267 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 SLC6A9P48067 706 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 MAN2A2P49641 1150 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 CCR5P51681 352 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 PRKAA2P54646 552 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 GNAI1P63096 354 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 TSPY1Q01534 308 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 SATB1Q01826 763 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 MRPL49Q13405 166 aaKnown RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 DLGAP5Q15398 846 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 MEA1Q16626 185 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 TCTN3Q6NUS6 607 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 EFCAB12Q6NXP0 572 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 DRICH1Q6PGQ1 229 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 C4orf50Q6ZRC1 276 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 ZNF572Q7Z3I7 529 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 PPP1R3BQ86XI6 285 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 HERC6Q8IVU3 1022 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 RHOT1Q8IXI2 618 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 FTSJ3Q8IY81 847 aaKnown RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 PIK3C3Q8NEB9 887 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 MDGA1Q8NFP4 955 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 HERVK_113Q902F9 699 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 MRGPRX4Q96LA9 322 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 ZNF512Q96ME7 567 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 DCLRE1CQ96SD1 692 aaKnown RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 AGXT2Q9BYV1 514 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 ZCCHC17Q9NP64 241 aaKnown RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 PNPOQ9NVS9 261 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 PARPBPQ9NWS1 579 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 FEZ2Q9UHY8 353 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 MAGEL2Q9UJ55 1249 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 GPR34Q9UPC5 381 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 SIK3Q9Y2K2 1263 aa3.62□□□□□ -1.83
HMGB1P14-201ENST00000557424 ANKRD18BA2A2Z9 1011 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 WNT10BO00744 389 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 TRIM24O15164 1050 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 HOXC11O43248 304 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 ADCY6O43306 1168 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 PLOD3O60568 738 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 USO1O60763 962 aaKnown RBP3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 SOAT2O75908 522 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 AMHP03971 560 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 ANXA1P04083 346 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 RARBP10826 455 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 ATP5JP18859 108 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 HDCP19113 662 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 ZEB1P37275 1124 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 PNLIPRP1P54315 467 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 FOXO1Q12778 655 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 SNAPC2Q13487 334 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 CUL4BQ13620 913 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 PTK2BQ14289 1009 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 RAB30Q15771 203 aa3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 SMAD1Q15797 465 aaKnown RBP3.61□□□□□ -1.83
HMGB1P14-201ENST00000557424 FAM133BQ5BKY9 247 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms