RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 TFB1MQ8WVM0 346 aaKnown RBP8.72□□□□□ -1.01
CHD8-213ENST00000557364 APBB2Q92870 758 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 RPRD1BQ9NQG5 326 aaKnown RBP8.72□□□□□ -1.01
CHD8-213ENST00000557364 EVPLLA8MZ36 301 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 PLSCR1O15162 318 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 AP1G2O75843 785 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 SERPIND1P05546 499 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 IRF1P10914 325 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 PPM1AP35813 382 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 SLCO1A2P46721 670 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 CAMK2GQ13555 558 aaPredicted RBP8.72□□□□□ -1.01
CHD8-213ENST00000557364 ITPK1Q13572 414 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 DHX40Q8IX18 779 aaKnown RBP8.72□□□□□ -1.01
CHD8-213ENST00000557364 IGDCC4Q8TDY8 1250 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 RBBP8Q99708 897 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 CNPY3Q9BT09 278 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 C6orf203Q9P0P8 240 aaPredicted RBP8.72□□□□□ -1.01
CHD8-213ENST00000557364 UMODL1Q5DID0 1318 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 SERPINB10P48595 397 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 CACNB2Q08289 660 aaPredicted RBP8.72□□□□□ -1.01
CHD8-213ENST00000557364 PDE1CQ14123 709 aaPredicted RBP8.72□□□□□ -1.01
CHD8-213ENST00000557364 RARS2Q5T160 578 aaKnown RBP8.72□□□□□ -1.01
CHD8-213ENST00000557364 RETSATQ6NUM9 610 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 HPS3Q969F9 1004 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 DNAJC7Q99615 494 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 GID8Q9NWU2 228 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 ZFP69BQ9UJL9 534 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 BLOC1S6Q9UL45 172 aa8.72□□□□□ -1.01
CHD8-213ENST00000557364 VWDEQ8N2E2 1590 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 IFRD1O00458 451 aaPredicted RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 ATXN8OSP0DMR3 200 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 GFPT1Q06210 699 aaPredicted RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 ANKRD23Q86SG2 305 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 SIRT2Q8IXJ6 389 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 COG1Q8WTW3 980 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 UROC1Q96N76 676 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 OXCT2Q9BYC2 517 aaPredicted RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 ZC3H7BQ9UGR2 993 aaKnown RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 DBR1Q9UK59 544 aaKnown RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 CDY2AQ9Y6F7 541 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 CDY1Q9Y6F8 540 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 CDH16O75309 829 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 IL1R1P14778 569 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 NMT1P30419 496 aaKnown RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 FLOT2Q14254 428 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 ZBTB41Q5SVQ8 909 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 ZNF544Q6NX49 715 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 COL23A1Q86Y22 540 aaPredicted RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 MMGT1Q8N4V1 131 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 PLEKHA8Q96JA3 519 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 RNPC3Q96LT9 517 aaKnown RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 TACO1Q9BSH4 297 aaKnown RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 MRIQ9BWK5 157 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 UBE2OQ9C0C9 1292 aaKnown RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 SCUBE2Q9NQ36 999 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 CD274Q9NZQ7 290 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 LIMA1Q9UHB6 759 aaKnown RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 TRMT6Q9UJA5 497 aaKnown RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 PRG3Q9Y2Y8 225 aaPredicted RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 PDHXO00330 501 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 TRIM66O15016 1216 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 ATP9BO43861 1147 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 PHF2O75151 1096 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 VCAM1P19320 739 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 SKOR1P84550 965 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 BYSLQ13895 437 aaKnown RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 LMBRD2Q68DH5 695 aaPredicted RBP8.71□□□□□ -1.01
CHD8-213ENST00000557364 ADGRF2Q8IZF7 708 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 HS6ST3Q8IZP7 471 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 ATP8B4Q8TF62 1192 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 CPVLQ9H3G5 476 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 STOML1Q9UBI4 398 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 PLAAQ9Y263 795 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 SNX24Q9Y343 169 aa8.71□□□□□ -1.01
CHD8-213ENST00000557364 SPATA31D1Q6ZQQ2 1576 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 A0A0G2JND7 137 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 PPP3CCP48454 512 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 HERVK_113P62684 666 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 BTG3Q14201 252 aaPredicted RBP8.71□□□□□ -1.02
CHD8-213ENST00000557364 Q4G0T1 1027 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 ANO5Q75V66 913 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 OXER1Q8TDS5 423 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 PPP1R16AQ96I34 528 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 XPNPEP3Q9NQH7 507 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 CHST12Q9NRB3 414 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.71□□□□□ -1.02
CHD8-213ENST00000557364 RWDD3Q9Y3V2 267 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 PPLO60437 1756 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 FAM205AQ6ZU69 1335 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 A0A088AWK7 358 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 GTPBP10A4D1E9 387 aaKnown RBP8.71□□□□□ -1.02
CHD8-213ENST00000557364 ITGALP20701 1170 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 ZNF10P21506 573 aaPredicted RBP8.71□□□□□ -1.02
CHD8-213ENST00000557364 JAK1P23458 1154 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 PTPN3P26045 913 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 KRT20P35900 424 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 RAP1GDS1P52306 607 aa8.71□□□□□ -1.02
CHD8-213ENST00000557364 KRT78Q8N1N4 520 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms