RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 A8MXQ7 604 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 ANHXE9PGG2 379 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 SLC16A3O15427 465 aaKnown RBP14.76□□□□□ -0.05
VPS33B-206ENST00000557358 GADD45BO75293 160 aaPredicted RBP14.76□□□□□ -0.05
VPS33B-206ENST00000557358 AKAP3O75969 853 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 FGFR1OPO95684 399 aaKnown RBP14.76□□□□□ -0.05
VPS33B-206ENST00000557358 C4BPAP04003 597 aaKnown RBP14.76□□□□□ -0.05
VPS33B-206ENST00000557358 PDGFRBP09619 1106 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 CEBPBP17676 345 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 EPHA5P54756 1037 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 CYP27A1Q02318 531 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 CFAP221Q4G0U5 840 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 PRSS36Q5K4E3 855 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 HFE2Q6ZVN8 426 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 SV2AQ7L0J3 742 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 LRRTM3Q86VH5 581 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 FBXL6Q8N531 539 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 ZNF516Q92618 1163 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 PRRX2Q99811 253 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 ATXN3LQ9H3M9 355 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 MMRN2Q9H8L6 949 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 WNT16Q9UBV4 365 aa14.76□□□□□ -0.05
VPS33B-206ENST00000557358 DPYSL4O14531 572 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 TRIM66O15016 1216 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 ECI2O75521 394 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 CCNE1P24864 410 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 GABRR2P28476 465 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 MAGEA11P43364 429 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 CETN1Q12798 172 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 SLC5A9Q2M3M2 681 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 ZCWPW2Q504Y3 356 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 WDR44Q5JSH3 913 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 TCERG1LQ5VWI1 586 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 KRT39Q6A163 491 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 KLHL10Q6JEL2 608 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 VSTM1Q6UX27 236 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 SCN4BQ8IWT1 228 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 HS6ST3Q8IZP7 471 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 ADSSL1Q8N142 457 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 TRIML1Q8N9V2 468 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 GIPC2Q8TF65 315 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 RSAD2Q8WXG1 361 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 ERCC4Q92889 916 aaPredicted RBP14.75□□□□□ -0.05
VPS33B-206ENST00000557358 SHDQ96IW2 340 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 CEP295NLQ96MC4 621 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 CRISPLD1Q9H336 500 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 METTL14Q9HCE5 456 aaKnown RBP14.75□□□□□ -0.05
VPS33B-206ENST00000557358 TMEM8AQ9HCN3 771 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 C11orf16Q9NQ32 467 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 MAN1B1Q9UKM7 699 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 NOTCH4Q99466 2003 aa14.75□□□□□ -0.05
VPS33B-206ENST00000557358 A0A1W2PRU2 124 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 SOAT2O75908 522 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 VNN2O95498 520 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 HLA-DRAP01903 254 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 DDX6P26196 483 aaKnown RBP eCLIP14.74□□□□□ -0.05
VPS33B-206ENST00000557358 GRIK1P39086 918 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 GCLMP48507 274 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 MXI1P50539 228 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 PSMC1P62191 440 aaKnown RBP14.74□□□□□ -0.05
VPS33B-206ENST00000557358 DLG4P78352 724 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 CCDC40Q4G0X9 1142 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 DCAF17Q5H9S7 520 aaPredicted RBP14.74□□□□□ -0.05
VPS33B-206ENST00000557358 ISM2Q6H9L7 571 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 FAM171BQ6P995 826 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 PARM1Q6UWI2 310 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 LIMS2Q7Z4I7 341 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 OSTM1Q86WC4 334 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 YAF2Q8IY57 180 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 TTC39CQ8N584 583 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 TTC9BQ8N6N2 239 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 MYCBPAPQ8TBZ2 947 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 PLEKHO2Q8TD55 490 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 KBTBD7Q8WVZ9 684 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 MRPS31Q92665 395 aaKnown RBP14.74□□□□□ -0.05
VPS33B-206ENST00000557358 SMARCD2Q92925 531 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 ELSPBP1Q96BH3 223 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 TCEAL4Q96EI5 215 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 CEP63Q96MT8 703 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 LPIN3Q9BQK8 851 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 MRPL45Q9BRJ2 306 aaKnown RBP14.74□□□□□ -0.05
VPS33B-206ENST00000557358 ELOVL4Q9GZR5 314 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 XYLT2Q9H1B5 865 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 DNAJC25Q9H1X3 360 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 KCNH6Q9H252 994 aa14.74□□□□□ -0.05
VPS33B-206ENST00000557358 ARMCX3Q9UH62 379 aaPredicted RBP14.74□□□□□ -0.05
VPS33B-206ENST00000557358 MAGED2Q9UNF1 606 aaPredicted RBP14.74□□□□□ -0.05
VPS33B-206ENST00000557358 MYBPHLA2RUH7 354 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 BIN1O00499 593 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 CFHP08603 1231 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 TRIM49P0CI25 452 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 TRIM49CP0CI26 452 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 PTPN1P18031 435 aaKnown RBP14.73□□□□□ -0.05
VPS33B-206ENST00000557358 CYP2F1P24903 491 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 TEAD2Q15562 447 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 MDH1BQ5I0G3 518 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 GPR158Q5T848 1215 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 ANKRD40Q6AI12 368 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 SCARA5Q6ZMJ2 495 aa14.73□□□□□ -0.05
VPS33B-206ENST00000557358 SIX5Q8N196 739 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms