RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ANKFY1Q9P2R3 1169 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 SLC24A2Q9UI40 661 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 LIN7AO14910 233 aaPredicted RBP11.98□□□□□ -0.49
SRP54-213ENST00000556994 TROVE2P10155 538 aaKnown RBP eCLIP11.98□□□□□ -0.49
SRP54-213ENST00000556994 MMP8P22894 467 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 BRD2P25440 801 aaKnown RBP11.98□□□□□ -0.49
SRP54-213ENST00000556994 MUM1Q2TAK8 710 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 MTERF2Q49AM1 385 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 TRIM72Q6ZMU5 477 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 C4orf50Q6ZRC1 276 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 RFX8Q6ZV50 586 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.98□□□□□ -0.49
SRP54-213ENST00000556994 DNAJC9Q8WXX5 260 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 TMEM143Q96AN5 459 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 VCPIP1Q96JH7 1222 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 SYT15Q9BQS2 421 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 MANSC1Q9H8J5 431 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 ZWILCHQ9H900 591 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 PXMP2Q9NR77 195 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 RBAKQ9NYW8 714 aaPredicted RBP11.98□□□□□ -0.49
SRP54-213ENST00000556994 DRG1Q9Y295 367 aaKnown RBP11.98□□□□□ -0.49
SRP54-213ENST00000556994 UTRNP46939 3433 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 TRAFD1O14545 582 aaPredicted RBP11.97□□□□□ -0.49
SRP54-213ENST00000556994 ZBED4O75132 1171 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 STBD1O95210 358 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 ZWINTO95229 277 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 CST3P01034 146 aaPredicted RBP11.97□□□□□ -0.49
SRP54-213ENST00000556994 SERPINB3P29508 390 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 CDKN2BP42772 138 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 KPNB1Q14974 876 aaKnown RBP11.97□□□□□ -0.49
SRP54-213ENST00000556994 BBS9Q3SYG4 887 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 THEMIS2Q5TEJ8 643 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 DNAJC24Q6P3W2 148 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 DRICH1Q6PGQ1 229 aaPredicted RBP11.97□□□□□ -0.49
SRP54-213ENST00000556994 TEX9Q8N6V9 391 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 DTX3LQ8TDB6 740 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 CPT1BQ92523 772 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 DCLRE1BQ9H816 532 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 AGTPBP1Q9UPW5 1226 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 SHOC2Q9UQ13 582 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 E7ENQ6 273 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 H0YIN7 160 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 KRT36O76013 467 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 NEFHP12036 1026 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 ERFP50548 548 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 CLDN10P78369 228 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 IRX1P78414 480 aaPredicted RBP11.97□□□□□ -0.49
SRP54-213ENST00000556994 OTUD4Q01804 1114 aaKnown RBP11.97□□□□□ -0.49
SRP54-213ENST00000556994 RCN1Q15293 331 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 CCDC6Q16204 474 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 ADGRD1Q6QNK2 874 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 RINLQ6ZS11 566 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 TTC7BQ86TV6 843 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 CCDC60Q8IWA6 550 aaPredicted RBP11.97□□□□□ -0.49
SRP54-213ENST00000556994 PALM2Q8IXS6 379 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 LMNTD2Q8IXW0 634 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 ACTL9Q8TC94 416 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 UCMAQ8WVF2 138 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 TARS2Q9BW92 718 aaKnown RBP11.97□□□□□ -0.49
SRP54-213ENST00000556994 PCDH9Q9HC56 1237 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 GINM1Q9NU53 330 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 NMRK1Q9NWW6 199 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 ARHGAP28Q9P2N2 729 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 LNPEPQ9UIQ6 1025 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
SRP54-213ENST00000556994 RIPK3Q9Y572 518 aa11.97□□□□□ -0.49
SRP54-213ENST00000556994 NFASCO94856 1347 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 ZNF646O15015 1829 aaPredicted RBP11.96□□□□□ -0.49
SRP54-213ENST00000556994 KAT6AQ92794 2004 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 CLGNO14967 610 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 GSC2O15499 205 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 HAUS5O94927 633 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 ITGAVP06756 1048 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 ZBTB16Q05516 673 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 ACSBG2Q5FVE4 666 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 TMEM154Q6P9G4 183 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 SCYL3Q8IZE3 742 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 BANPQ8N9N5 519 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 SPDYE1Q8NFV5 336 aaPredicted RBP11.96□□□□□ -0.49
SRP54-213ENST00000556994 MZB1Q8WU39 189 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 DCAKDQ8WVC6 231 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 NRG4Q8WWG1 115 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 TTC17Q96AE7 1141 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 ZBTB10Q96DT7 871 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 BTBD10Q9BSF8 475 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 TSSK1BQ9BXA7 367 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 TLE6Q9H808 572 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 C17orf75Q9HAS0 396 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 KCNK13Q9HB14 408 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 PDLIM7Q9NR12 457 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 SAR1AQ9NR31 198 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 CYP26B1Q9NR63 512 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 ZNRF3Q9ULT6 936 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 CHMP2BQ9UQN3 213 aa11.96□□□□□ -0.49
SRP54-213ENST00000556994 DOCK5Q9H7D0 1870 aa11.96□□□□□ -0.5
SRP54-213ENST00000556994 LRRIQ4A6NIV6 560 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 GYG2O15488 501 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 CST8O60676 142 aa11.95□□□□□ -0.5
SRP54-213ENST00000556994 CCDC22O60826 627 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms