RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 RAPGEF4Q8WZA2 1011 aa6.42□□□□□ -1.38
HIF1A-209ENST00000556827 PHACTR3Q96KR7 559 aa6.42□□□□□ -1.38
HIF1A-209ENST00000556827 MRGPRX4Q96LA9 322 aa6.42□□□□□ -1.38
HIF1A-209ENST00000556827 NUP88Q99567 741 aaPredicted RBP6.42□□□□□ -1.38
HIF1A-209ENST00000556827 VRK1Q99986 396 aaPredicted RBP6.42□□□□□ -1.38
HIF1A-209ENST00000556827 TEX101Q9BY14 249 aa6.42□□□□□ -1.38
HIF1A-209ENST00000556827 WDR11Q9BZH6 1224 aa6.42□□□□□ -1.38
HIF1A-209ENST00000556827 MOCS1Q9NZB8 636 aa6.42□□□□□ -1.38
HIF1A-209ENST00000556827 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.42□□□□□ -1.38
HIF1A-209ENST00000556827 CCNL1Q9UK58 526 aaPredicted RBP6.42□□□□□ -1.38
HIF1A-209ENST00000556827 LRRC37A3O60309 1634 aa6.42□□□□□ -1.38
HIF1A-209ENST00000556827 MAP3K5Q99683 1374 aa6.42□□□□□ -1.38
HIF1A-209ENST00000556827 EDC4Q6P2E9 1401 aaKnown RBP6.42□□□□□ -1.38
HIF1A-209ENST00000556827 TRPM1Q7Z4N2 1603 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 TCRBV7S2A1N4TA0A589 114 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 TMEM200CA6NKL6 621 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 ZNF185O15231 689 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 SBK3P0C264 359 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 MYBP10242 640 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 ATP5JP18859 108 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 VCAM1P19320 739 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 LPOP22079 712 aaPredicted RBP6.41□□□□□ -1.38
HIF1A-209ENST00000556827 CYP2C19P33261 490 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 CLRN1P58418 232 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 MXRA7P84157 204 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 BEAN1Q3B7T3 259 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 KHDC1Q4VXA5 237 aaKnown RBP6.41□□□□□ -1.38
HIF1A-209ENST00000556827 PPP4R3AQ6IN85 833 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 ZNF529Q6P280 563 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 FMNL3Q8IVF7 1028 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 CPEB3Q8NE35 698 aaKnown RBP6.41□□□□□ -1.38
HIF1A-209ENST00000556827 NSUN6Q8TEA1 469 aaKnown RBP6.41□□□□□ -1.38
HIF1A-209ENST00000556827 HPS3Q969F9 1004 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 MVB12AQ96EY5 273 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 TOR3AQ9H497 397 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 METTL14Q9HCE5 456 aaKnown RBP6.41□□□□□ -1.38
HIF1A-209ENST00000556827 ZNHIT2Q9UHR6 403 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 USP15Q9Y4E8 981 aaPredicted RBP6.41□□□□□ -1.38
HIF1A-209ENST00000556827 CFAP20Q9Y6A4 193 aaKnown RBP6.41□□□□□ -1.38
HIF1A-209ENST00000556827 QRICH2Q9H0J4 1663 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 CGNL1Q0VF96 1302 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 TONSLQ96HA7 1378 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 USP47Q96K76 1375 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 RGPD3A6NKT7 1758 aaPredicted RBP6.41□□□□□ -1.38
HIF1A-209ENST00000556827 RGPD4Q7Z3J3 1758 aa6.41□□□□□ -1.38
HIF1A-209ENST00000556827 PEAK1Q9H792 1746 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 UNC119BA6NIH7 251 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 PJA2O43164 708 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 SGTAO43765 313 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 OFD1O75665 1012 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 PARNO95453 639 aaKnown RBP6.4□□□□□ -1.38
HIF1A-209ENST00000556827 LMNAP02545 664 aaKnown RBP6.4□□□□□ -1.38
HIF1A-209ENST00000556827 SNRPA1P09661 255 aaKnown RBP6.4□□□□□ -1.38
HIF1A-209ENST00000556827 SLC6A2P23975 617 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 DDX6P26196 483 aaKnown RBP eCLIP6.4□□□□□ -1.38
HIF1A-209ENST00000556827 ZEB1P37275 1124 aaPredicted RBP6.4□□□□□ -1.38
HIF1A-209ENST00000556827 CTXN1P60606 82 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 GUCY1B3Q02153 619 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 TAP1Q03518 808 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 PGS1Q32NB8 556 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 ATXN7L2Q5T6C5 722 aaPredicted RBP6.4□□□□□ -1.38
HIF1A-209ENST00000556827 FAM102BQ5T8I3 360 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 OTUD7BQ6GQQ9 843 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 Q6YL49 198 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 GADL1Q6ZQY3 521 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 EPM2AIP1Q7L775 607 aaPredicted RBP6.4□□□□□ -1.38
HIF1A-209ENST00000556827 ARHGEF19Q8IW93 802 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 FBXO34Q9NWN3 711 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 PCDHA3Q9Y5H8 950 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 FPGT-TNNI3KV9GXZ4 949 aa6.4□□□□□ -1.38
HIF1A-209ENST00000556827 SMG6Q86US8 1419 aaKnown RBP6.4□□□□□ -1.39
HIF1A-209ENST00000556827 NFAT5O94916 1531 aa6.4□□□□□ -1.39
HIF1A-209ENST00000556827 PIK3C2AO00443 1686 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 KIAA0391O15091 583 aaKnown RBP6.39□□□□□ -1.39
HIF1A-209ENST00000556827 DTNBO60941 627 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 ALDH2P05091 517 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 HOXC9P31274 260 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 BMPR1AP36894 532 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 AVPR1BP47901 424 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 CHN2P52757 468 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 TLE1Q04724 770 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 SNAPC2Q13487 334 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 MLC1Q15049 377 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 ATAT1Q5SQI0 421 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 B3GNT9Q6UX72 402 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 TTC7BQ86TV6 843 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 WDR75Q8IWA0 830 aaKnown RBP6.39□□□□□ -1.39
HIF1A-209ENST00000556827 MAP3K14Q99558 947 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 C11orf54Q9H0W9 315 aaPredicted RBP6.39□□□□□ -1.39
HIF1A-209ENST00000556827 RIOX1Q9H6W3 641 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 MAP3K19Q56UN5 1328 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 ANKRD36BQ8N2N9 1353 aa6.39□□□□□ -1.39
HIF1A-209ENST00000556827 DRGXA6NNA5 263 aa6.38□□□□□ -1.39
HIF1A-209ENST00000556827 PRSS23O95084 383 aa6.38□□□□□ -1.39
HIF1A-209ENST00000556827 FTLP02792 175 aaPredicted RBP6.38□□□□□ -1.39
HIF1A-209ENST00000556827 SLC6A4P31645 630 aa6.38□□□□□ -1.39
HIF1A-209ENST00000556827 ADRA1BP35368 520 aa6.38□□□□□ -1.39
HIF1A-209ENST00000556827 MAP2K6P52564 334 aa6.38□□□□□ -1.39
HIF1A-209ENST00000556827 TMF1P82094 1093 aa6.38□□□□□ -1.39
HIF1A-209ENST00000556827 UBXN2BQ14CS0 331 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms