RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 TRIM59Q8IWR1 403 aa9.44□□□□□ -0.9
PRKCH-222ENST00000556778 TOP6BLQ8N6T0 577 aa9.44□□□□□ -0.9
PRKCH-222ENST00000556778 STKLD1Q8NE28 680 aa9.44□□□□□ -0.9
PRKCH-222ENST00000556778 PKMYT1Q99640 499 aa9.44□□□□□ -0.9
PRKCH-222ENST00000556778 ARID3AQ99856 593 aa9.44□□□□□ -0.9
PRKCH-222ENST00000556778 SLC24A3Q9HC58 644 aa9.44□□□□□ -0.9
PRKCH-222ENST00000556778 CRTAC1Q9NQ79 661 aa9.44□□□□□ -0.9
PRKCH-222ENST00000556778 RAB20Q9NX57 234 aa9.44□□□□□ -0.9
PRKCH-222ENST00000556778 HMGXB4Q9UGU5 601 aa9.44□□□□□ -0.9
PRKCH-222ENST00000556778 R3HCC1Q9Y3T6 440 aaKnown RBP9.44□□□□□ -0.9
PRKCH-222ENST00000556778 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.44□□□□□ -0.9
PRKCH-222ENST00000556778 SYCE3A1L190 88 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 MTMR11A4FU01 709 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 OR6C75A6NL08 312 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 STAU1O95793 577 aaKnown RBP9.43□□□□□ -0.9
PRKCH-222ENST00000556778 ATF2P15336 505 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 ERCC5P28715 1186 aaPredicted RBP9.43□□□□□ -0.9
PRKCH-222ENST00000556778 ATICP31939 592 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 GTF2H1P32780 548 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 FMO5P49326 533 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 MXI1P50539 228 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 TNNC1P63316 161 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 CREMQ03060 361 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 KCNH2Q12809 1159 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 SMAD4Q13485 552 aaKnown RBP9.43□□□□□ -0.9
PRKCH-222ENST00000556778 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 SMAD2Q15796 467 aaKnown RBP9.43□□□□□ -0.9
PRKCH-222ENST00000556778 KLHL40Q2TBA0 621 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 ZNF667Q5HYK9 610 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 PPM1LQ5SGD2 360 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 SDHAF4Q5VUM1 108 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 FOXR2Q6PJQ5 311 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 GRASPQ7Z6J2 395 aaPredicted RBP9.43□□□□□ -0.9
PRKCH-222ENST00000556778 GPR149Q86SP6 731 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 PARP9Q8IXQ6 854 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 THEM5Q8N1Q8 247 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 OR6B3Q8NGW1 331 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 LMO3Q8TAP4 145 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 WHAMMQ8TF30 809 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 SUSD6Q92537 303 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 KAT5Q92993 513 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 SYAP1Q96A49 352 aaPredicted RBP9.43□□□□□ -0.9
PRKCH-222ENST00000556778 RPGRIP1Q96KN7 1286 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 CNOT6LQ96LI5 555 aaKnown RBP9.43□□□□□ -0.9
PRKCH-222ENST00000556778 TWNKQ96RR1 684 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 POMKQ9H5K3 350 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 VRTNQ9H8Y1 702 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 FANCLQ9NW38 375 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 CEP72Q9P209 647 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 DSEQ9UL01 958 aa9.43□□□□□ -0.9
PRKCH-222ENST00000556778 A8MXQ7 604 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 CLDN5O00501 218 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 PRRG1O14668 218 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 N4BP1O75113 896 aaKnown RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 TACC1O75410 805 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 CALCAP01258 141 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 HOXB8P17481 243 aaPredicted RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 CD58P19256 250 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 WARSP23381 471 aaKnown RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 PAX3P23760 479 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 CYP2F1P24903 491 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 CACNA2D1P54289 1103 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 MARSP56192 900 aaKnown RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 NOP14P78316 857 aaKnown RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 ENPEPQ07075 957 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 TWF1Q12792 350 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 CBX2Q14781 532 aaPredicted RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 NCAPHQ15003 741 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 DDR2Q16832 855 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 TPD52L1Q16890 204 aaPredicted RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 ANO6Q4KMQ2 910 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 INTS6LQ5JSJ4 861 aaKnown RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 ATAT1Q5SQI0 421 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 FAM171BQ6P995 826 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 DPH6Q7L8W6 267 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 TCEAL8Q8IYN2 117 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 TMEM86AQ8N2M4 240 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 C12orf29Q8N999 325 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 FBXL13Q8NEE6 735 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 ADAMTS19Q8TE59 1207 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 GIPC2Q8TF65 315 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 SMG7Q92540 1137 aaKnown RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 ACBD6Q9BR61 282 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 CRACR2AQ9BSW2 395 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 FUCA2Q9BTY2 467 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 PRKD2Q9BZL6 878 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 HSD3B7Q9H2F3 369 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 SNX25Q9H3E2 840 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 PLEKHA4Q9H4M7 779 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 SFXN1Q9H9B4 322 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 METTL14Q9HCE5 456 aaKnown RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 TMEM30AQ9NV96 361 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 DZANK1Q9NVP4 752 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 ABI2Q9NYB9 513 aaPredicted RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 DNMT3BQ9UBC3 853 aaKnown RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 AFF4Q9UHB7 1163 aaKnown RBP9.42□□□□□ -0.9
PRKCH-222ENST00000556778 COQ4Q9Y3A0 265 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 NFE2L3Q9Y4A8 694 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 RALGAPA2Q2PPJ7 1873 aa9.42□□□□□ -0.9
PRKCH-222ENST00000556778 A0A0C4DFX4 3053 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms