RNA–Protein interactions for RNA: ENST00000556577.1

STRN3-208, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-208ENST00000556577 FGFR1P11362 822 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 ODC1P11926 461 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 WARSP23381 471 aaKnown RBP8.29□□□□□ -1.08
STRN3-208ENST00000556577 PBX2P40425 430 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 CLCNKBP51801 687 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 AFF1P51825 1210 aaKnown RBP8.29□□□□□ -1.08
STRN3-208ENST00000556577 HADHBP55084 474 aaKnown RBP8.29□□□□□ -1.08
STRN3-208ENST00000556577 CNGA2Q16280 664 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 GOLGA7BQ2TAP0 167 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 CLLU1OSQ5K130 101 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 MMS22LQ6ZRQ5 1243 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 MON1BQ7L1V2 547 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 PEX26Q7Z412 305 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 DEFB128Q7Z7B8 93 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 DAAM2Q86T65 1068 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 ACOT1Q86TX2 421 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 ERICH1Q86X53 443 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 METTL23Q86XA0 190 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 PHF13Q86YI8 300 aaPredicted RBP8.29□□□□□ -1.08
STRN3-208ENST00000556577 TMEM86AQ8N2M4 240 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 PDCL2Q8N4E4 241 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 MNS1Q8NEH6 495 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 ZNF564Q8TBZ8 553 aaPredicted RBP8.29□□□□□ -1.08
STRN3-208ENST00000556577 IPO4Q8TEX9 1081 aaKnown RBP8.29□□□□□ -1.08
STRN3-208ENST00000556577 RSPH1Q8WYR4 309 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 VCPIP1Q96JH7 1222 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 TNIP3Q96KP6 325 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 SENP8Q96LD8 212 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 NUP85Q9BW27 656 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 MIS12Q9H081 205 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 WNT8AQ9H1J5 351 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 LHX5Q9H2C1 402 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 SYNCQ9H7C4 482 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 L2HGDHQ9H9P8 463 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 PRDM5Q9NQX1 630 aaPredicted RBP8.29□□□□□ -1.08
STRN3-208ENST00000556577 HESX1Q9UBX0 185 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 STRIP2Q9ULQ0 834 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.29□□□□□ -1.08
STRN3-208ENST00000556577 HYOU1Q9Y4L1 999 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 MRFAP1Q9Y605 127 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 SAR1BQ9Y6B6 198 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 SCINQ9Y6U3 715 aa8.29□□□□□ -1.08
STRN3-208ENST00000556577 FNDC1Q4ZHG4 1894 aaPredicted RBP8.29□□□□□ -1.08
STRN3-208ENST00000556577 TMEM110-MUSTN1A8MSY1 372 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 B3GAT3O94766 335 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 MTA2O94776 668 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 MICAL2O94851 1124 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 KIF4AO95239 1232 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 SLU7O95391 586 aaKnown RBP8.28□□□□□ -1.08
STRN3-208ENST00000556577 CFHP08603 1231 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 PDGFRBP09619 1106 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 SETSIPP0DME0 302 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 TCP1P17987 556 aaKnown RBP8.28□□□□□ -1.08
STRN3-208ENST00000556577 CDH5P33151 784 aaPredicted RBP8.28□□□□□ -1.08
STRN3-208ENST00000556577 LHX1P48742 406 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 SNX16P57768 344 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 CKAP4Q07065 602 aaKnown RBP8.28□□□□□ -1.08
STRN3-208ENST00000556577 IKBKEQ14164 716 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 GPNMBQ14956 572 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 TCEAL1Q15170 157 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 RPS6KA1Q15418 735 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 UPP1Q16831 310 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 WHAMMP3Q1A5X7 153 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 LRRC26Q2I0M4 334 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 PAPD7Q5XG87 772 aaKnown RBP8.28□□□□□ -1.08
STRN3-208ENST00000556577 WSCD1Q658N2 575 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 C11orf63Q6NUN7 778 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 DENND1BQ6P3S1 775 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 DNAJC24Q6P3W2 148 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 CNKSR3Q6P9H4 555 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 DCLRE1AQ6PJP8 1040 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 LCLAT1Q6UWP7 414 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 LIMS2Q7Z4I7 341 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 NPAS4Q8IUM7 802 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 ZNF687Q8N1G0 1237 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 LRRC57Q8N9N7 239 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 MYRIPQ8NFW9 859 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 SPATA18Q8TC71 538 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 KBTBD7Q8WVZ9 684 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 ZSWIM1Q9BR11 485 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 MRPL9Q9BYD2 267 aaKnown RBP8.28□□□□□ -1.08
STRN3-208ENST00000556577 MRPL47Q9HD33 250 aaKnown RBP8.28□□□□□ -1.08
STRN3-208ENST00000556577 OSGEPQ9NPF4 335 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 FAM49BQ9NUQ9 324 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 TBC1D13Q9NVG8 400 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 CACNG4Q9UBN1 327 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 CDC23Q9UJX2 597 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 TSPAN16Q9UKR8 245 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 AMFRQ9UKV5 643 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 DSEQ9UL01 958 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 STXBP5LQ9Y2K9 1186 aa8.28□□□□□ -1.08
STRN3-208ENST00000556577 CENPFP49454 3210 aa8.27□□□□□ -1.08
STRN3-208ENST00000556577 LTBP2Q14767 1821 aa8.27□□□□□ -1.09
STRN3-208ENST00000556577 NCK2O43639 380 aa8.27□□□□□ -1.09
STRN3-208ENST00000556577 BUB1BO60566 1050 aaPredicted RBP8.27□□□□□ -1.09
STRN3-208ENST00000556577 RAG1P15918 1043 aa8.27□□□□□ -1.09
STRN3-208ENST00000556577 MMP8P22894 467 aa8.27□□□□□ -1.09
STRN3-208ENST00000556577 RRM1P23921 792 aa8.27□□□□□ -1.09
STRN3-208ENST00000556577 PCSK1P29120 753 aa8.27□□□□□ -1.09
STRN3-208ENST00000556577 ADORA2BP29275 332 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms