RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 FBXO47Q5MNV8 452 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 CCDC26Q8TAB7 109 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 GLT1D1Q96MS3 346 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 FAM105AQ9NUU6 356 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 PCDH10Q9P2E7 1040 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 CYTH4Q9UIA0 394 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.57■□□□□ 0.08
VPS33B-205ENST00000556096 BHMG1C9JSJ3 638 aaPredicted RBP15.57■□□□□ 0.08
VPS33B-205ENST00000556096 PSTPIP1O43586 416 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 SASH3O75995 380 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 GLI1P08151 1106 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 LRPAP1P30533 357 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 GPD2P43304 727 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 GABRB2P47870 512 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 NFX1Q12986 1120 aaKnown RBP15.57■□□□□ 0.08
VPS33B-205ENST00000556096 ORC1Q13415 861 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 ZNF268Q14587 947 aaPredicted RBP15.57■□□□□ 0.08
VPS33B-205ENST00000556096 PTPN20Q4JDL3 420 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 FAM26DQ5JW98 314 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 LIMS2Q7Z4I7 341 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 MAATS1Q7Z4T9 603 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 RHOT1Q8IXI2 618 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 EIF1ADQ8N9N8 165 aaKnown RBP15.57■□□□□ 0.08
VPS33B-205ENST00000556096 C18orf8Q96DM3 657 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 MRPL45Q9BRJ2 306 aaKnown RBP15.57■□□□□ 0.08
VPS33B-205ENST00000556096 TRAIPQ9BWF2 469 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 ERVK-5Q9HDB9 667 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 PHF24Q9UPV7 400 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 SIGLEC16A6NMB1 481 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 KPNA7A9QM74 516 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 CTSHP09668 335 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 FAM163BP0C2L3 166 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 THPOP40225 353 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 TAF6P49848 677 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 RPL7AP62424 266 aaKnown RBP15.56■□□□□ 0.08
VPS33B-205ENST00000556096 MRPS25P82663 173 aaKnown RBP15.56■□□□□ 0.08
VPS33B-205ENST00000556096 SOWAHAQ2M3V2 549 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 SV2CQ496J9 727 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 AADACL2Q6P093 401 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 MRPL10Q7Z7H8 261 aaKnown RBP15.56■□□□□ 0.08
VPS33B-205ENST00000556096 SLC13A5Q86YT5 568 aaPredicted RBP15.56■□□□□ 0.08
VPS33B-205ENST00000556096 NIPA2Q8N8Q9 360 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 AENQ8WTP8 325 aaKnown RBP15.56■□□□□ 0.08
VPS33B-205ENST00000556096 DDX27Q96GQ7 796 aaKnown RBP15.56■□□□□ 0.08
VPS33B-205ENST00000556096 PPP1R10Q96QC0 940 aaKnown RBP15.56■□□□□ 0.08
VPS33B-205ENST00000556096 DDX47Q9H0S4 455 aaKnown RBP15.56■□□□□ 0.08
VPS33B-205ENST00000556096 C11orf49Q9H6J7 331 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 EPB41L5Q9HCM4 733 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.56■□□□□ 0.08
VPS33B-205ENST00000556096 SQORQ9Y6N5 450 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 SCN1AP35498 2009 aa15.56■□□□□ 0.08
VPS33B-205ENST00000556096 M0QYV0 167 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 PTGESO14684 152 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 FSCN2O14926 492 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 CAND2O75155 1236 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 MYBL2P10244 700 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 GUCY2DQ02846 1103 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 SOX4Q06945 474 aaPredicted RBP15.55■□□□□ 0.08
VPS33B-205ENST00000556096 PIGHQ14442 188 aaPredicted RBP15.55■□□□□ 0.08
VPS33B-205ENST00000556096 TRIM71Q2Q1W2 868 aaKnown RBP15.55■□□□□ 0.08
VPS33B-205ENST00000556096 DCUN1D2Q6PH85 259 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.55■□□□□ 0.08
VPS33B-205ENST00000556096 CPXM1Q96SM3 734 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 DNAI2Q9GZS0 605 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 MIS12Q9H081 205 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 AGO3Q9H9G7 860 aaKnown RBP15.55■□□□□ 0.08
VPS33B-205ENST00000556096 STARD7Q9NQZ5 370 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 SLC38A7Q9NVC3 462 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 MTUS1Q9ULD2 1270 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 NR2E1Q9Y466 385 aa15.55■□□□□ 0.08
VPS33B-205ENST00000556096 ZNF623O75123 536 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 GJB6O95452 261 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 EPHB4P54760 987 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 CASP8Q14790 479 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 CYP1B1Q16678 543 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 CYP4A22Q5TCH4 519 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 LRRC38Q5VT99 294 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 DPH6Q7L8W6 267 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 XYLT1Q86Y38 959 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 KATNAL2Q8IYT4 538 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 KRT222Q8N1A0 295 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 CRYBG2Q8N1P7 616 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 FNIP1Q8TF40 1166 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 MAIP1Q8WWC4 291 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 MCRS1Q96EZ8 462 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 MCEEQ96PE7 176 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 VIPAS39Q9H9C1 493 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 TRMT13Q9NUP7 481 aaKnown RBP15.54■□□□□ 0.08
VPS33B-205ENST00000556096 RNF19AQ9NV58 838 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 TSPAN16Q9UKR8 245 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 PADI3Q9ULW8 664 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 GIT1Q9Y2X7 761 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
VPS33B-205ENST00000556096 SPTLC1O15269 473 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 PHF2O75151 1096 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 SETSIPP0DME0 302 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 KRT3P12035 628 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 COL6A1P12109 1028 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 CHRNA3P32297 505 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 RAB27AP51159 221 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms