RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 POU3F3P20264 500 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-233ENST00000555816 DYNLL1P63167 89 aaKnown RBP5.85□□□□□ -1.47
ATXN3-233ENST00000555816 DGCR2P98153 550 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 G3BP1Q13283 466 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATXN3-233ENST00000555816 PLS1Q14651 629 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 KCTD2Q14681 263 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 ALDH1L2Q3SY69 923 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 PLEKHG4Q58EX7 1191 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 TRIM61Q5EBN2 209 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 CCDC158Q5M9N0 1113 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 LRSAM1Q6UWE0 723 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 ADGRA1Q86SQ6 560 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 PCSK9Q8NBP7 692 aaKnown RBP5.85□□□□□ -1.47
ATXN3-233ENST00000555816 HIPK4Q8NE63 616 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 GSTCDQ8NEC7 633 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 ZSWIM2Q8NEG5 633 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 GFM2Q969S9 779 aaKnown RBP5.85□□□□□ -1.47
ATXN3-233ENST00000555816 EXOC2Q96KP1 924 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 GLT1D1Q96MS3 346 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 SLC6A15Q9H2J7 730 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 IL23AQ9NPF7 189 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 FAM184BQ9ULE4 1060 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATXN3-233ENST00000555816 COG5Q9UP83 839 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 CNPY2Q9Y2B0 182 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 CTDP1Q9Y5B0 961 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-233ENST00000555816 AK9Q5TCS8 1911 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 ZNF521Q96K83 1311 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-233ENST00000555816 A0A1W2PRG0 241 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 SLC12A8A0AV02 714 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 CAPN14A8MX76 684 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 SCDO00767 359 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 HIP1RO75146 1068 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 DUSP11O75319 330 aaKnown RBP5.84□□□□□ -1.47
ATXN3-233ENST00000555816 FLOT1O75955 427 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 GNAI3P08754 354 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 GUCY1A2P33402 732 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 SHMT1P34896 483 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 TFF2Q03403 129 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 MTX1Q13505 466 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 SEPT2Q15019 361 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 ARHGAP44Q17R89 818 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 TKFCQ3LXA3 575 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 TTC39AQ5SRH9 613 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 CCSAPQ6IQ19 270 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-233ENST00000555816 KLHDC10Q6PID8 442 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 C16orf86Q6ZW13 317 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 ULK2Q8IYT8 1036 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 RPUSD2Q8IZ73 545 aaKnown RBP5.84□□□□□ -1.47
ATXN3-233ENST00000555816 MSL3Q8N5Y2 521 aaKnown RBP5.84□□□□□ -1.47
ATXN3-233ENST00000555816 NEU4Q8WWR8 484 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-233ENST00000555816 API5Q9BZZ5 524 aaKnown RBP5.84□□□□□ -1.47
ATXN3-233ENST00000555816 SPC25Q9HBM1 224 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 CEP72Q9P209 647 aa5.84□□□□□ -1.47
ATXN3-233ENST00000555816 MUC3AQ02505 3323 aa5.84□□□□□ -1.48
ATXN3-233ENST00000555816 DOCK1Q14185 1865 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 PLXNB2O15031 1838 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 PHIPQ8WWQ0 1821 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 A0A0U1RQG5 324 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-233ENST00000555816 PI4K2BG5E9Z4 385 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 MPHOSPH10O00566 681 aaKnown RBP5.83□□□□□ -1.48
ATXN3-233ENST00000555816 PPP1R12AO14974 1030 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-233ENST00000555816 PGK2P07205 417 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 ASGR1P07306 291 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 CST5P28325 142 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-233ENST00000555816 COPB2P35606 906 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 STAT3P40763 770 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 PLCD1P51178 756 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 ADCY7P51828 1080 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 RIN1Q13671 783 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 TMEM132BQ14DG7 1078 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 FNDC7Q5VTL7 733 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 TMED8Q6PL24 325 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-233ENST00000555816 OVCH1Q7RTY7 1134 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 KIAA0907Q7Z7F0 614 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-233ENST00000555816 MRGPRGQ86SM5 289 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 ZNF575Q86XF7 245 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 MIGA1Q8NAN2 632 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 OR14K1Q8NGZ2 314 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 MIEF2Q96C03 454 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 SLC7A6OSQ96CW6 309 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-233ENST00000555816 MEIS3Q99687 375 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 FOXB1Q99853 325 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 SEZ6LQ9BYH1 1024 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 SH2D4AQ9H788 454 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 GPR108Q9NPR9 543 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 PIH1D3Q9NQM4 214 aaKnown RBP5.83□□□□□ -1.48
ATXN3-233ENST00000555816 SMC4Q9NTJ3 1288 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 SAE1Q9UBE0 346 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-233ENST00000555816 NOB1Q9ULX3 412 aaKnown RBP5.83□□□□□ -1.48
ATXN3-233ENST00000555816 ADAMTS5Q9UNA0 930 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 PRUNE2Q8WUY3 3088 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 LOC285556D6RIA3 1793 aa5.83□□□□□ -1.48
ATXN3-233ENST00000555816 ROBO3Q96MS0 1386 aa5.82□□□□□ -1.48
ATXN3-233ENST00000555816 SYNRGQ9UMZ2 1314 aa5.82□□□□□ -1.48
ATXN3-233ENST00000555816 A0A1W2PRX2 142 aa5.82□□□□□ -1.48
ATXN3-233ENST00000555816 ANKRD62A6NC57 917 aa5.82□□□□□ -1.48
ATXN3-233ENST00000555816 SMIM22K7EJ46 135 aa5.82□□□□□ -1.48
ATXN3-233ENST00000555816 CABYRO75952 493 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms