RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 FGFR4P22455 802 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 PIK3CBP42338 1070 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 HTR3AP46098 478 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 MXRA7P84157 204 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 TAP2Q03519 686 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 OCA2Q04671 838 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 ZNF844Q08AG5 666 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 IFIT5Q13325 482 aaKnown RBP4.13□□□□□ -1.75
SRP54-209ENST00000555746 FAM160B1Q5W0V3 765 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 MICU3Q86XE3 530 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 MAPKAPK5Q8IW41 473 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 TMEM132CQ8N3T6 1108 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 POC1BQ8TC44 478 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 GJA10Q969M2 543 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 TRIM43Q96BQ3 446 aaPredicted RBP4.13□□□□□ -1.75
SRP54-209ENST00000555746 SPATA5L1Q9BVQ7 753 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 ZNF518BQ9C0D4 1074 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 PARPBPQ9NWS1 579 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 TRPM5Q9NZQ8 1165 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 VSX1Q9NZR4 365 aaPredicted RBP4.13□□□□□ -1.75
SRP54-209ENST00000555746 COL20A1Q9P218 1284 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 CTTNBP2NLQ9P2B4 639 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 DKK2Q9UBU2 259 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 SRRDQ9UH36 339 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 AFF4Q9UHB7 1163 aaKnown RBP4.13□□□□□ -1.75
SRP54-209ENST00000555746 KCNE5Q9UJ90 142 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 FPGT-TNNI3KV9GXZ4 949 aa4.13□□□□□ -1.75
SRP54-209ENST00000555746 TNS2Q63HR2 1409 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 ATP10BO94823 1461 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 CCDC195A0A1B0GUA6 201 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 A0A1W2PS29 197 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 C1QTNF3-AMACRE9PGA6 284 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 M0QYG6 137 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 RNASET2O00584 256 aaKnown RBP4.12□□□□□ -1.75
SRP54-209ENST00000555746 KIF20AO95235 890 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 GPANK1O95872 356 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 GRPP07492 148 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 IFIT2P09913 472 aaKnown RBP4.12□□□□□ -1.75
SRP54-209ENST00000555746 KCNA2P16389 499 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 BMPR1AP36894 532 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 VIPR2P41587 438 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 SLC11A2P49281 568 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 PRIM2P49643 509 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 TOB1P50616 345 aaPredicted RBP4.12□□□□□ -1.75
SRP54-209ENST00000555746 WNT3P56703 355 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 SLC25A3Q00325 362 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 SLC13A2Q13183 592 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 CTBP1Q13363 440 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 RAB32Q13637 225 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 DAG1Q14118 895 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 AMOTQ4VCS5 1084 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 USP39Q53GS9 565 aaKnown RBP4.12□□□□□ -1.75
SRP54-209ENST00000555746 SPDYAQ5MJ70 313 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 B3GNTL1Q67FW5 361 aaPredicted RBP4.12□□□□□ -1.75
SRP54-209ENST00000555746 LMBRD2Q68DH5 695 aaPredicted RBP4.12□□□□□ -1.75
SRP54-209ENST00000555746 ARMC6Q6NXE6 501 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 DPP9Q86TI2 863 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 C1orf210Q8IVY1 113 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 PALM2Q8IXS6 379 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 FAM46DQ8NEK8 389 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 CPT1CQ8TCG5 803 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 UBE2Q2Q8WVN8 375 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 EXTL1Q92935 676 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 FUBP1Q96AE4 644 aaKnown RBP4.12□□□□□ -1.75
SRP54-209ENST00000555746 BOD1Q96IK1 185 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 LRIG1Q96JA1 1093 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 TBCBQ99426 244 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 SMOQ99835 787 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 ELAC2Q9BQ52 826 aaKnown RBP4.12□□□□□ -1.75
SRP54-209ENST00000555746 COLEC11Q9BWP8 271 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 TEX101Q9BY14 249 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 TMEM74BQ9NUR3 256 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 HESX1Q9UBX0 185 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 PADI4Q9UM07 663 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 CDYLQ9Y232 598 aa4.12□□□□□ -1.75
SRP54-209ENST00000555746 MYADML2A6NDP7 307 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 MBD3L4A6NDZ8 208 aaPredicted RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 MBD3L3A6NE82 208 aaPredicted RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 RASA4BC9J798 803 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 F8W8V4 182 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 POLRMTO00411 1230 aaKnown RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 RASA4O43374 803 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 SOAT2O75908 522 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 SUN1O94901 812 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 IL18RAPO95256 599 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 CYP2C9P11712 490 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 NR4A1P22736 598 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 ZFP36P26651 326 aaKnown RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 UCP3P55916 312 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 RPS16P62249 146 aaKnown RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 HSD11B2P80365 405 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 FAM189BP81408 668 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 HTRA4P83105 476 aaPredicted RBP4.11□□□□□ -1.75
SRP54-209ENST00000555746 ZNF543Q08ER8 600 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 BRD3Q15059 726 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 LONRF1Q17RB8 773 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 BEAN1Q3B7T3 259 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 SLC44A4Q53GD3 710 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 TAPT1Q6NXT6 567 aa4.11□□□□□ -1.75
SRP54-209ENST00000555746 FOXR2Q6PJQ5 311 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms