RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 DCUN1D2Q6PH85 259 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 CCDC60Q8IWA6 550 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-209ENST00000554913 ASAP3Q8TDY4 903 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 PYROXD1Q8WU10 500 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 ATP6V0A1Q93050 837 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 ANKRD27Q96NW4 1050 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 CNTN6Q9UQ52 1028 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 FARP1Q9Y4F1 1045 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-209ENST00000554913 MYH9P35579 1960 aaKnown RBP17.45■□□□□ 0.38
XRCC3-209ENST00000554913 WDR46O15213 610 aaKnown RBP17.45■□□□□ 0.38
XRCC3-209ENST00000554913 LINGO3P0C6S8 592 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 PEX19P40855 299 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 CTCFP49711 727 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-209ENST00000554913 PRKCEQ02156 737 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 GRIK3Q13003 919 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 MTERF2Q49AM1 385 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 FYB2Q5VWT5 728 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 DNAJC24Q6P3W2 148 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 C3orf62Q6ZUJ4 267 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 PAXIP1Q6ZW49 1069 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-209ENST00000554913 PTPRN2Q92932 1015 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 TMEM143Q96AN5 459 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 PAFAH2Q99487 392 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 ZFATQ9P243 1243 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 ANKFY1Q9P2R3 1169 aa17.45■□□□□ 0.38
XRCC3-209ENST00000554913 TCRBV5S1A1TA0A578 114 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 E7ENQ6 273 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 PCK1P35558 622 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 RTP1P59025 263 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 BAATQ14032 418 aaPredicted RBP17.44■□□□□ 0.38
XRCC3-209ENST00000554913 SEPT7Q16181 437 aaKnown RBP17.44■□□□□ 0.38
XRCC3-209ENST00000554913 ZNF394Q53GI3 561 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 LRRC38Q5VT99 294 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 RHPN2Q8IUC4 686 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 RDM1Q8NG50 284 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 SLC35B2Q8TB61 432 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 CPT1BQ92523 772 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 TLE6Q9H808 572 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 A0A0G2JND7 137 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 BRD2P25440 801 aaKnown RBP17.44■□□□□ 0.38
XRCC3-209ENST00000554913 MARK3P27448 753 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 KHDC1Q4VXA5 237 aaKnown RBP17.44■□□□□ 0.38
XRCC3-209ENST00000554913 VSIG10LQ86VR7 867 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.44■□□□□ 0.38
XRCC3-209ENST00000554913 MZB1Q8WU39 189 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 TARS2Q9BW92 718 aaKnown RBP17.44■□□□□ 0.38
XRCC3-209ENST00000554913 CADM1Q9BY67 442 aaKnown RBP17.44■□□□□ 0.38
XRCC3-209ENST00000554913 PPCSQ9HAB8 311 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 MAP3K20Q9NYL2 800 aaKnown RBP17.44■□□□□ 0.38
XRCC3-209ENST00000554913 LNPEPQ9UIQ6 1025 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 ZNRF3Q9ULT6 936 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.44■□□□□ 0.38
XRCC3-209ENST00000554913 RIPK3Q9Y572 518 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 STYXL1Q9Y6J8 313 aa17.44■□□□□ 0.38
XRCC3-209ENST00000554913 TCRBV7S3A2A0A539 114 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 ZBED4O75132 1171 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 NR3C2P08235 984 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 PDHA1P08559 390 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 TROVE2P10155 538 aaKnown RBP eCLIP17.43■□□□□ 0.38
XRCC3-209ENST00000554913 TBXAS1P24557 533 aaPredicted RBP17.43■□□□□ 0.38
XRCC3-209ENST00000554913 NCOA4Q13772 614 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 SMTNL2Q2TAL5 461 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 CYP4A22Q5TCH4 519 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 ADGRD1Q6QNK2 874 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 DSTYKQ6XUX3 929 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 LRRC6Q86X45 466 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 FBXO36Q8NEA4 188 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 ACTL9Q8TC94 416 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 PRR11Q96HE9 360 aaPredicted RBP17.43■□□□□ 0.38
XRCC3-209ENST00000554913 WNK4Q96J92 1243 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 SSU72Q9NP77 194 aaKnown RBP17.43■□□□□ 0.38
XRCC3-209ENST00000554913 SAR1AQ9NR31 198 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 ARL8BQ9NVJ2 186 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 SNCAIPQ9Y6H5 919 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
XRCC3-209ENST00000554913 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 WDR81Q562E7 1941 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 CFAP69A5D8W1 941 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 CST3P01034 146 aaPredicted RBP17.43■□□□□ 0.38
XRCC3-209ENST00000554913 HARSP12081 509 aaKnown RBP17.43■□□□□ 0.38
XRCC3-209ENST00000554913 KCNA2P16389 499 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 ATP6V1C1P21283 382 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 OTUD4Q01804 1114 aaKnown RBP17.43■□□□□ 0.38
XRCC3-209ENST00000554913 SPDYAQ5MJ70 313 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 C4orf50Q6ZRC1 276 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 BANPQ8N9N5 519 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 ATP11CQ8NB49 1132 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 GMLQ99445 158 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 LBHD1Q9BQE6 289 aaPredicted RBP17.43■□□□□ 0.38
XRCC3-209ENST00000554913 HEY2Q9UBP5 337 aa17.43■□□□□ 0.38
XRCC3-209ENST00000554913 DPPA5A6NC42 116 aa17.42■□□□□ 0.38
XRCC3-209ENST00000554913 RGS20O76081 388 aa17.42■□□□□ 0.38
XRCC3-209ENST00000554913 EDN1P05305 212 aa17.42■□□□□ 0.38
XRCC3-209ENST00000554913 CALB1P05937 261 aa17.42■□□□□ 0.38
XRCC3-209ENST00000554913 PSAPP07602 524 aa17.42■□□□□ 0.38
XRCC3-209ENST00000554913 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
XRCC3-209ENST00000554913 ZNF132P52740 706 aa17.42■□□□□ 0.38
XRCC3-209ENST00000554913 SESN3P58005 492 aa17.42■□□□□ 0.38
XRCC3-209ENST00000554913 APBB1IPQ7Z5R6 666 aaPredicted RBP17.42■□□□□ 0.38
XRCC3-209ENST00000554913 PPIL6Q8IXY8 311 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms