RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 KLRC2P26717 231 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 SOX5P35711 763 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 PTPN21Q16825 1174 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 C4orf50Q6ZRC1 276 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 RTL10Q7L3V2 364 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 BAP1Q92560 729 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 FUBP3Q96I24 572 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 TWNKQ96RR1 684 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 ABCB6Q9NP58 842 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 HMGXB4Q9UGU5 601 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 AFF4Q9UHB7 1163 aaKnown RBP17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 DPP7Q9UHL4 492 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 ADCY5O95622 1261 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 GYPCP04921 128 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 VDRP11473 427 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 FXR1P51114 621 aaKnown RBP eCLIP17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 ZBED6P86452 979 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 STILQ15468 1287 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 CFAP221Q4G0U5 840 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 ZNF394Q53GI3 561 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 ACOT1Q86TX2 421 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 SPPL2BQ8TCT7 592 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 DPEP3Q9H4B8 488 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 TLE6Q9H808 572 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 CRTAC1Q9NQ79 661 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 GTF3C4Q9UKN8 822 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 LUC7L2Q9Y383 392 aaKnown RBP17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 MTCH2Q9Y6C9 303 aa17.49■□□□□ 0.39
SPTLC2-203ENST00000554901 WDR27A2RRH5 827 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 MYBPHLA2RUH7 354 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 ADAM12O43184 909 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 HCRTO43612 131 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 ATP8B3O60423 1300 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 GLUD1P00367 558 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 ATF2P15336 505 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 PSMC1P62191 440 aaKnown RBP17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 PTK2Q05397 1052 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 MEA1Q16626 185 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 DUSP6Q16828 381 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 SLC39A12Q504Y0 691 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 SGO2Q562F6 1265 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 LILRA6Q6PI73 481 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 ELMSAN1Q6PJG2 1045 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 LRRTM3Q86VH5 581 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 HDAC7Q8WUI4 952 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 SYN2Q92777 582 aaPredicted RBP17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 HEXIM2Q96MH2 286 aaKnown RBP17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 TMEM209Q96SK2 561 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 PCDHB5Q9Y5E4 795 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 PCDHGC5Q9Y5F6 944 aa17.48■□□□□ 0.39
SPTLC2-203ENST00000554901 RNF225M0QZC1 329 aaPredicted RBP17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 CLASP2O75122 1294 aaKnown RBP17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 ATP2C2O75185 946 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 FERP16591 822 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 USP8P40818 1118 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 CLCN4P51793 760 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 TBX2Q13207 712 aaPredicted RBP17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 MDH1BQ5I0G3 518 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 ARHGAP17Q68EM7 881 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 TMC6Q7Z403 805 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 PCED1BQ96HM7 432 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 HNRNPABQ99729 332 aaKnown RBP17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 PLEKHA4Q9H4M7 779 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 AIPL1Q9NZN9 384 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 MTMR11A4FU01 709 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 CYP26A1O43174 497 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 MED7O43513 233 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 TGM5O43548 720 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 NCK2O43639 380 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 OR4Q2P0C623 313 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 CLCN1P35523 988 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 MAGEA11P43364 429 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 ARPP19P56211 112 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 ADGRE1Q14246 886 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 ARID5BQ14865 1188 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 VSTM1Q6UX27 236 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 ADGRD2Q7Z7M1 963 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 SPATA2LQ8IUW3 424 aaPredicted RBP17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 CNGA4Q8IV77 575 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 TCEAL8Q8IYN2 117 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 DEFB123Q8N688 67 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 SLC22A17Q8WUG5 538 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 MYLPFQ96A32 169 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 CYFIP2Q96F07 1278 aa17.47■□□□□ 0.39
SPTLC2-203ENST00000554901 MYO7AQ13402 2215 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 LRRC53A6NM62 1247 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 CSPG5O95196 566 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 CD19P15391 556 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 GNA15P30679 374 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 CASP14P31944 242 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 ELF1P32519 619 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 NRIP1P48552 1158 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 TUFMP49411 452 aaKnown RBP17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 ORC1Q13415 861 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 CNGA2Q16280 664 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 RNF19BQ6ZMZ0 732 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 ZNF677Q86XU0 584 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 PALB2Q86YC2 1186 aa17.46■□□□□ 0.39
SPTLC2-203ENST00000554901 GLYCTKQ8IVS8 523 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms