RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 CLPTM1O96005 669 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 TFAP2AP05549 437 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 RPA3P35244 121 aaPredicted RBP16.44■□□□□ 0.22
SYNE3-203ENST00000554873 KRT17Q04695 432 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 RHOT2Q8IXI1 618 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 FAM178BQ8IXR5 827 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.44■□□□□ 0.22
SYNE3-203ENST00000554873 POP1Q99575 1024 aaKnown RBP16.44■□□□□ 0.22
SYNE3-203ENST00000554873 TCHPQ9BT92 498 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 WDR18Q9BV38 432 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 TUFT1Q9NNX1 390 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 LRRC4BQ9NT99 713 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 CHORDC1Q9UHD1 332 aaPredicted RBP16.44■□□□□ 0.22
SYNE3-203ENST00000554873 A0A0G2JND7 137 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 TMEM110-MUSTN1A8MSY1 372 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 NDUFB10O96000 172 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 HADHBP55084 474 aaKnown RBP16.43■□□□□ 0.22
SYNE3-203ENST00000554873 COG7P83436 770 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 PPIDQ08752 370 aaKnown RBP16.43■□□□□ 0.22
SYNE3-203ENST00000554873 LPIN1Q14693 890 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 SLC1A5Q15758 541 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 MMEL1Q495T6 779 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 ANKRD20A4Q4UJ75 823 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 SFT2D3Q587I9 215 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 C11orf63Q6NUN7 778 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 SLC13A5Q86YT5 568 aaPredicted RBP16.43■□□□□ 0.22
SYNE3-203ENST00000554873 TMPRSS6Q8IU80 811 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 KCTD17Q8N5Z5 321 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 SENP1Q9P0U3 644 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 TCRBV7S2A1N4TA0A589 114 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 CA4P22748 312 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 MSLNQ13421 630 aaPredicted RBP16.43■□□□□ 0.22
SYNE3-203ENST00000554873 FAM172AQ8WUF8 416 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 PRPF31Q8WWY3 499 aaKnown RBP16.43■□□□□ 0.22
SYNE3-203ENST00000554873 TRIM55Q9BYV6 548 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 LRRC19Q9H756 370 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 UBE2TQ9NPD8 197 aaPredicted RBP16.43■□□□□ 0.22
SYNE3-203ENST00000554873 MTO1Q9Y2Z2 717 aaKnown RBP16.43■□□□□ 0.22
SYNE3-203ENST00000554873 ADAMTSL1Q8N6G6 1762 aa16.43■□□□□ 0.22
SYNE3-203ENST00000554873 PPEF1O14829 653 aaPredicted RBP16.42■□□□□ 0.22
SYNE3-203ENST00000554873 PSMD10O75832 226 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 FGFR1P11362 822 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 ITGA8P53708 1063 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 CDK16Q00536 496 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 SIX1Q15475 284 aaPredicted RBP16.42■□□□□ 0.22
SYNE3-203ENST00000554873 NADK2Q4G0N4 442 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 ODR4Q5SWX8 454 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 AAGABQ6PD74 315 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 SH3BP5LQ7L8J4 393 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 ZFP28Q8NHY6 868 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 ZFRQ96KR1 1074 aaKnown RBP16.42■□□□□ 0.22
SYNE3-203ENST00000554873 DHRS1Q96LJ7 313 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 WRAP73Q9P2S5 460 aaPredicted RBP16.42■□□□□ 0.22
SYNE3-203ENST00000554873 C15orf38-AP3S2A0A0A6YYH1 394 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 SH3PXD2BA1X283 911 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 TRMUO75648 421 aaKnown RBP16.42■□□□□ 0.22
SYNE3-203ENST00000554873 GDF11O95390 407 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 CRKP46108 304 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 DLG4P78352 724 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 BFSP1Q12934 665 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 DLG1Q12959 904 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 ARPINQ7Z6K5 226 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 DHDDSQ86SQ9 333 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 NGLY1Q96IV0 654 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 C8orf37Q96NL8 207 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 KLHL4Q9C0H6 718 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 UTP6Q9NYH9 597 aaKnown RBP16.42■□□□□ 0.22
SYNE3-203ENST00000554873 PI4KBQ9UBF8 816 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 FAF1Q9UNN5 650 aaPredicted RBP16.42■□□□□ 0.22
SYNE3-203ENST00000554873 FADS3Q9Y5Q0 445 aa16.42■□□□□ 0.22
SYNE3-203ENST00000554873 ADCY3O60266 1144 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 TOM1O60784 492 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 TM7SF2O76062 418 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 COMTP21964 271 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 HDAC4P56524 1084 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 CLPPQ16740 277 aaPredicted RBP16.41■□□□□ 0.22
SYNE3-203ENST00000554873 PRUNE1Q86TP1 453 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 PRR11Q96HE9 360 aaPredicted RBP16.41■□□□□ 0.22
SYNE3-203ENST00000554873 FBXO6Q9NRD1 293 aaPredicted RBP16.41■□□□□ 0.22
SYNE3-203ENST00000554873 SEL1LQ9UBV2 794 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 B2RBV5 119 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 ABHD2P08910 425 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 GPC5P78333 572 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 PLCB3Q01970 1234 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 RELAQ04206 551 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 MESDQ14696 234 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 MAPK6Q16659 721 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 C1orf146Q5VVC0 180 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 FAM91A1Q658Y4 838 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 ZNF746Q6NUN9 644 aaPredicted RBP16.41■□□□□ 0.22
SYNE3-203ENST00000554873 TATDN1Q6P1N9 297 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 RNF207Q6ZRF8 634 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 NANOGNBQ7Z5D8 188 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 ARHGEF19Q8IW93 802 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 PLEKHO2Q8TD55 490 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 GMCL1Q96IK5 515 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 SNX27Q96L92 541 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 TRAIPQ9BWF2 469 aa16.41■□□□□ 0.22
SYNE3-203ENST00000554873 HBS1LQ9Y450 684 aaKnown RBP16.41■□□□□ 0.22
SYNE3-203ENST00000554873 MATN2O00339 956 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms