RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 ARFIP2P53365 341 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 WNT3P56703 355 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 LOXL3P58215 753 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 FAM193AP78312 1265 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 BOP1Q14137 746 aaKnown RBP4.99□□□□□ -1.61
SCFD1-214ENST00000554819 GRM3Q14832 879 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 RBM20Q5T481 1227 aaKnown RBP4.99□□□□□ -1.61
SCFD1-214ENST00000554819 KAZNQ674X7 775 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 KIAA0895LQ68EN5 471 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 TMEM108Q6UXF1 575 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 FAM156AQ8NDB6 213 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 CAGE1Q8TC20 777 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 FBXO41Q8TF61 875 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 LPIN2Q92539 896 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 AGAP2Q99490 1192 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 C22orf23Q9BZE7 217 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 DPH1Q9BZG8 443 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 AMBRA1Q9C0C7 1298 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 TTYH3Q9C0H2 523 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 SLITRK6Q9H5Y7 841 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 DDX20Q9UHI6 824 aaKnown RBP4.99□□□□□ -1.61
SCFD1-214ENST00000554819 SHOC2Q9UQ13 582 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 GOLIM4O00461 696 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 TPP1O14773 563 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 MGEA5O60502 916 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 LMNAP02545 664 aaKnown RBP4.98□□□□□ -1.61
SCFD1-214ENST00000554819 EN2P19622 333 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-214ENST00000554819 CXCR5P32302 372 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 SLC11A2P49281 568 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 UCP3P55916 312 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 SLC13A2Q13183 592 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 RAB32Q13637 225 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 ZNF169Q14929 603 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-214ENST00000554819 KIAA0753Q2KHM9 967 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 ICE2Q659A1 982 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 OLFML1Q6UWY5 402 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 TSHZ1Q6ZSZ6 1077 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 SLC15A4Q8N697 577 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 DNAJC5GQ8N7S2 189 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 ACTRT2Q8TDY3 377 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 LRTOMTQ8WZ04 291 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 TTC17Q96AE7 1141 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 FAM136AQ96C01 138 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 C8orf48Q96LL4 319 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 PTDSS2Q9BVG9 487 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 ALG8Q9BVK2 526 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 ACTRT3Q9BYD9 372 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 LRRC27Q9C0I9 530 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 KLC4Q9NSK0 619 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 ZSCAN32Q9NX65 697 aa4.98□□□□□ -1.61
SCFD1-214ENST00000554819 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.98□□□□□ -1.61
SCFD1-214ENST00000554819 A6NNZ2 444 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 MYO1FO00160 1098 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 KIF3BO15066 747 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 MYF5P13349 255 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 LRPAP1P30533 357 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 CTBP1Q13363 440 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 POLD3Q15054 466 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-214ENST00000554819 SWSAP1Q6NVH7 229 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 APOA5Q6Q788 366 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 DGKHQ86XP1 1220 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 GPR150Q8NGU9 434 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 MYCBPAPQ8TBZ2 947 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 CCDC136Q96JN2 1154 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 ZNF518BQ9C0D4 1074 aa4.97□□□□□ -1.61
SCFD1-214ENST00000554819 A0A087WWL8 130 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 DCLK1O15075 740 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 TBX3O15119 743 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 CHRM2P08172 466 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 HMGB1P09429 215 aaKnown RBP4.96□□□□□ -1.62
SCFD1-214ENST00000554819 BRAFP15056 766 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 TYRP1P17643 537 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 RHCEP18577 417 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 RPL17P18621 184 aaKnown RBP4.96□□□□□ -1.62
SCFD1-214ENST00000554819 PPIFP30405 207 aaKnown RBP4.96□□□□□ -1.62
SCFD1-214ENST00000554819 RARRES1P49788 294 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 HNRNPMP52272 730 aaKnown RBP eCLIP4.96□□□□□ -1.62
SCFD1-214ENST00000554819 SUMO3P55854 103 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-214ENST00000554819 LILRA4P59901 499 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 RHDQ02161 417 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 COL10A1Q03692 680 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 E2F2Q14209 437 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 HLTFQ14527 1009 aaKnown RBP eCLIP4.96□□□□□ -1.621e-7■□□□□ 9.6
SCFD1-214ENST00000554819 CNGA2Q16280 664 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 MGAT5BQ3V5L5 792 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 PRR16Q569H4 304 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 TEDDM1Q5T9Z0 273 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 COL23A1Q86Y22 540 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-214ENST00000554819 FAM109AQ8N4B1 249 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.96□□□□□ -1.62
SCFD1-214ENST00000554819 APIPQ96GX9 242 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 PDLIM2Q96JY6 352 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 PCGF6Q9BYE7 350 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 KIAA1586Q9HCI6 787 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 A1CFQ9NQ94 594 aaKnown RBP4.96□□□□□ -1.62
SCFD1-214ENST00000554819 GEMIN8Q9NWZ8 242 aaKnown RBP4.96□□□□□ -1.62
SCFD1-214ENST00000554819 FOXJ2Q9P0K8 574 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 ZNHIT2Q9UHR6 403 aa4.96□□□□□ -1.62
SCFD1-214ENST00000554819 OGDHLQ9ULD0 1010 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms