RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CCT7Q99832 543 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 PI4K2AQ9BTU6 479 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 RUSC1Q9BVN2 902 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 EXOSC4Q9NPD3 245 aaKnown RBP14.54□□□□□ -0.08
VTI1B-204ENST00000554659 PIN4Q9Y237 131 aaKnown RBP14.54□□□□□ -0.08
VTI1B-204ENST00000554659 ATF7IP2Q5U623 682 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 SUGP1Q8IWZ8 645 aaKnown RBP14.53□□□□□ -0.08
VTI1B-204ENST00000554659 KCNH7Q9NS40 1196 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 DMGDHQ9UI17 866 aaKnown RBP14.53□□□□□ -0.08
VTI1B-204ENST00000554659 CAMSAP1Q5T5Y3 1602 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 TRPC5OSA6NMA1 111 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 C19orf81C9J6K1 198 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 RUNX1T1Q06455 604 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 EFL1Q7Z2Z2 1120 aaKnown RBP14.53□□□□□ -0.08
VTI1B-204ENST00000554659 ELMOD1Q8N336 334 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 FAM111AQ96PZ2 611 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 DDX50Q9BQ39 737 aaKnown RBP14.53□□□□□ -0.08
VTI1B-204ENST00000554659 AGXT2Q9BYV1 514 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 TMEM161AQ9NX61 479 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 SETD1BQ9UPS6 1966 aaKnown RBP14.53□□□□□ -0.08
VTI1B-204ENST00000554659 KCNQ2O43526 872 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 CAND2O75155 1236 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 FDFT1P37268 417 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 CPA2P48052 419 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 DEFA1P59665 94 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 DEFA3P59666 94 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 RCN1Q15293 331 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 EPC2Q52LR7 807 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 GJC2Q5T442 439 aaPredicted RBP14.53□□□□□ -0.08
VTI1B-204ENST00000554659 MROH9Q5TGP6 573 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 TRAF7Q6Q0C0 670 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 KDELC2Q7Z4H8 507 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 FBXL16Q8N461 479 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 PACSIN1Q9BY11 444 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 ARHGAP20Q9P2F6 1191 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 HEY2Q9UBP5 337 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 ZC3H11AO75152 810 aaKnown RBP eCLIP14.53□□□□□ -0.08
VTI1B-204ENST00000554659 SERPINB1P30740 379 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 EFHC1Q5JVL4 640 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 WLSQ5T9L3 541 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 LRRC6Q86X45 466 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 SPATA2LQ8IUW3 424 aaPredicted RBP14.53□□□□□ -0.08
VTI1B-204ENST00000554659 ZNF280CQ8ND82 737 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 ATP8B4Q8TF62 1192 aa14.53□□□□□ -0.08
VTI1B-204ENST00000554659 CAB39Q9Y376 341 aaPredicted RBP14.53□□□□□ -0.08
VTI1B-204ENST00000554659 GLRA3O75311 464 aa14.52□□□□□ -0.08
VTI1B-204ENST00000554659 SOX11P35716 441 aa14.52□□□□□ -0.08
VTI1B-204ENST00000554659 NAPEPLDQ6IQ20 393 aa14.52□□□□□ -0.08
VTI1B-204ENST00000554659 CHORDC1Q9UHD1 332 aaPredicted RBP14.52□□□□□ -0.08
VTI1B-204ENST00000554659 GRAP2O75791 330 aa14.52□□□□□ -0.08
VTI1B-204ENST00000554659 BRD2P25440 801 aaKnown RBP14.52□□□□□ -0.08
VTI1B-204ENST00000554659 THEMIS2Q5TEJ8 643 aa14.52□□□□□ -0.08
VTI1B-204ENST00000554659 CCNJLQ8IV13 435 aa14.52□□□□□ -0.08
VTI1B-204ENST00000554659 EFHBQ8N7U6 833 aa14.52□□□□□ -0.08
VTI1B-204ENST00000554659 C1orf131Q8NDD1 294 aaKnown RBP14.52□□□□□ -0.08
VTI1B-204ENST00000554659 PRMT7Q9NVM4 692 aaPredicted RBP14.52□□□□□ -0.08
VTI1B-204ENST00000554659 STMN3Q9NZ72 180 aa14.52□□□□□ -0.08
VTI1B-204ENST00000554659 LOC100653049A0A140TA62 436 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 E7ENQ6 273 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 NFIBO00712 420 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 KRT34O76011 436 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 SGPL1O95470 568 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 TCN1P20061 433 aaPredicted RBP14.52□□□□□ -0.09
VTI1B-204ENST00000554659 CLK1P49759 484 aaKnown RBP14.52□□□□□ -0.09
VTI1B-204ENST00000554659 SLC44A4Q53GD3 710 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 IER5Q5VY09 327 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 FASTKD5Q7L8L6 764 aaKnown RBP14.52□□□□□ -0.09
VTI1B-204ENST00000554659 RBM46Q8TBY0 533 aaKnown RBP14.52□□□□□ -0.09
VTI1B-204ENST00000554659 USP33Q8TEY7 942 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 SH3KBP1Q96B97 665 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 OTUD5Q96G74 571 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 ABHD8Q96I13 439 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 RHBDL2Q9NX52 303 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 NDUFA13Q9P0J0 144 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.52□□□□□ -0.09
VTI1B-204ENST00000554659 A0A1B0GW55 424 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 H2AFYO75367 372 aaKnown RBP14.52□□□□□ -0.09
VTI1B-204ENST00000554659 DUX4L2P0CJ85 424 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 DUX4L3P0CJ86 424 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 DUX4L4P0CJ87 422 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 DUX4L5P0CJ88 424 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 DUX4L6P0CJ89 424 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 DUX4L7P0CJ90 424 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 GHRP10912 638 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 CPB1P15086 417 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 RPS6P62753 249 aaKnown RBP14.52□□□□□ -0.09
VTI1B-204ENST00000554659 KBTBD12Q3ZCT8 623 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 PRR5LQ6MZQ0 368 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 CDC42EP4Q9H3Q1 356 aaKnown RBP14.52□□□□□ -0.09
VTI1B-204ENST00000554659 CD163L1Q9NR16 1453 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 OLFML3Q9NRN5 406 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 DUX4Q9UBX2 424 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 POLIQ9UNA4 740 aa14.52□□□□□ -0.09
VTI1B-204ENST00000554659 UBE2Q2LH0YL09 131 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 NDUFS3O75489 264 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 GRIK1P39086 918 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 PTGER2P43116 358 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 PTK6Q13882 451 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 ZNF669Q96BR6 464 aaPredicted RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 TMEM245Q9H330 911 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms