RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 HSD17B4P51659 736 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 RPS6KA3P51812 740 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 AK2P54819 239 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 ARHGAP1Q07960 439 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 GPS2Q13227 327 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 MPP3Q13368 585 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 MINDY4Q4G0A6 757 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 HERC4Q5GLZ8 1057 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 SYDE2Q5VT97 1194 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 CXCL17Q6UXB2 119 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 C4orf50Q6ZRC1 276 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 SEPT14Q6ZU15 432 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 LRRTM3Q86VH5 581 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 EFCAB13Q8IY85 973 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 AADATQ8N5Z0 425 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 MEIOBQ8N635 442 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 CEP70Q8NHQ1 597 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 PPTC7Q8NI37 304 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 THAP3Q8WTV1 239 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 RNF139Q8WU17 664 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 KAT2BQ92831 832 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 APBB2Q92870 758 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 MRPL38Q96DV4 380 aaKnown RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 HIC2Q96JB3 615 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 EAF1Q96JC9 268 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 TGS1Q96RS0 853 aaKnown RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 PIGSQ96S52 555 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 TBCBQ99426 244 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 NUP88Q99567 741 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 ADPGKQ9BRR6 497 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 TRIM56Q9BRZ2 755 aaKnown RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 ZPBPQ9BS86 351 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 ACAT2Q9BWD1 397 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 PLVAPQ9BX97 442 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 WDR11Q9BZH6 1224 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 FOXP3Q9BZS1 431 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 RC3H2Q9HBD1 1191 aaKnown RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 MKNK2Q9HBH9 465 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 MAN1C1Q9NR34 630 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 DNAAF2Q9NVR5 837 aaKnown RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 SIRT5Q9NXA8 310 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 AIPL1Q9NZN9 384 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 MTUS1Q9ULD2 1270 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 ARID1BQ8NFD5 2236 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-206ENST00000554429 WDR81Q562E7 1941 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 SYNJ2BP-COX16A0A087WUM0 186 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 TMEM232C9JQI7 657 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 H0Y626 953 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 H3BNC9 293 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 CEP104O60308 925 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 DOK2O60496 412 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 RFPL1O75677 317 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 KCNH1O95259 989 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 SERPINC1P01008 464 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 NPPAP01160 153 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 CA3P07451 260 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 WEE1P30291 646 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 ICAM3P32942 547 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 ADH7P40394 386 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 SLC1A4P43007 532 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 PEX5P50542 639 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 HDAC4P56524 1084 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 ADAM17P78536 824 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 SSRP1Q08945 709 aaKnown RBP2.9□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF543Q08ER8 600 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 STAT4Q14765 748 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 TEAD4Q15561 434 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 CLPPQ16740 277 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-206ENST00000554429 SH2D4BQ5SQS7 431 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF362Q5T0B9 420 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-206ENST00000554429 STXBP5Q5T5C0 1151 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 HAUS3Q68CZ6 603 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 INTS8Q75QN2 995 aaKnown RBP2.9□□□□□ -1.95
PRPF39-206ENST00000554429 OR6J1Q8NGC5 347 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-206ENST00000554429 ASB12Q8WXK4 309 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 TTC17Q96AE7 1141 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 PABPC5Q96DU9 382 aaKnown RBP2.9□□□□□ -1.95
PRPF39-206ENST00000554429 SGCZQ96LD1 299 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 FNBP1Q96RU3 617 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 UQCC2Q9BRT2 126 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 B3GNT4Q9C0J1 378 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 NSRP1Q9H0G5 558 aaKnown RBP2.9□□□□□ -1.95
PRPF39-206ENST00000554429 BOLA2Q9H3K6 86 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 EPHX3Q9H6B9 360 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 PDGFCQ9NRA1 345 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 HPF1Q9NWY4 346 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 STIM2Q9P246 746 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 AASSQ9UDR5 926 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 CCDC39Q9UFE4 941 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 PLXNA4Q9HCM2 1894 aa2.9□□□□□ -1.95
PRPF39-206ENST00000554429 FRMD3A2A2Y4 597 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 LINC01553A4QN01 128 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 CFAP99D6REC4 459 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 PROB1E7EW31 1015 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 INO80B-WBP1J3KQ70 363 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 UBXN8O00124 270 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 SGSM2O43147 1006 aa2.89□□□□□ -1.95
PRPF39-206ENST00000554429 DYNC1LI2O43237 492 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-206ENST00000554429 MICAL2O94851 1124 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms