RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 CXCL10P02778 98 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 UQCRFS1P1P0C7P4 283 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 ATF7P17544 494 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-223ENST00000553686 SHMT1P34896 483 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 RRP1P56182 461 aaKnown RBP6.96□□□□□ -1.3
ATXN3-223ENST00000553686 COASYQ13057 564 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 PKN3Q6P5Z2 889 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 DDX53Q86TM3 631 aaKnown RBP6.96□□□□□ -1.3
ATXN3-223ENST00000553686 KBTBD2Q8IY47 623 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 SMRP1Q8NCR6 262 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 CHST13Q8NET6 341 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 MSLNLQ96KJ4 702 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 NEUROD6Q96NK8 337 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 YME1L1Q96TA2 773 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 KATNBL1Q9H079 304 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 GALNT8Q9NY28 637 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 TNPO3Q9Y5L0 923 aaKnown RBP6.96□□□□□ -1.3
ATXN3-223ENST00000553686 DOCK2Q92608 1830 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 ZNF236Q9UL36 1845 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 TRIOO75962 3097 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 IL16Q14005 1332 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 ATP2A1O14983 1001 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 OPA1O60313 960 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 TBX10O75333 385 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 ASLP04424 464 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 MYL3P08590 195 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 PTGS1P23219 599 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 BUD31P41223 144 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-223ENST00000553686 PURAQ00577 322 aaKnown RBP6.95□□□□□ -1.3
ATXN3-223ENST00000553686 KIAA1755Q5JYT7 1200 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 Q6ZUG5 572 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 LRRC8DQ7L1W4 858 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 NOSTRINQ8IVI9 506 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 MYOCDQ8IZQ8 938 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 REPS2Q8NFH8 660 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 CYP2W1Q8TAV3 490 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 USP44Q9H0E7 712 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 INCENPQ9NQS7 918 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 KCNH7Q9NS40 1196 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 SAMD15Q9P1V8 674 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 ADAM29Q9UKF5 820 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 RALYQ9UKM9 306 aaKnown RBP6.95□□□□□ -1.3
ATXN3-223ENST00000553686 USP15Q9Y4E8 981 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-223ENST00000553686 RAD50Q92878 1312 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 GPR179Q6PRD1 2367 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 FAM208BQ5VWN6 2430 aa6.95□□□□□ -1.3
ATXN3-223ENST00000553686 PRR5-ARHGAP8B1AHC4 643 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 C5orf67F2Z3F1 127 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 M0R2C6 588 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 DNAJC8O75937 253 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-223ENST00000553686 PLATP00750 562 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 ITGB3P05106 788 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 MMEP08473 750 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 SDSP20132 328 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 AOAHP28039 575 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 IGFALSP35858 605 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 BMPR1AP36894 532 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 ATXN1P54253 815 aaKnown RBP6.94□□□□□ -1.3
ATXN3-223ENST00000553686 ARHGAP8P85298 464 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 ICA1Q05084 483 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 GPNMBQ14956 572 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 ANGPT1Q15389 498 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 PTGISQ16647 500 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 FSTL4Q6MZW2 842 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 ZCCHC8Q6NZY4 707 aaKnown RBP6.94□□□□□ -1.3
ATXN3-223ENST00000553686 CPXCR1Q8N123 301 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 EFHBQ8N7U6 833 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 PRPF38AQ8NAV1 312 aaKnown RBP6.94□□□□□ -1.3
ATXN3-223ENST00000553686 DLG3Q92796 817 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 SLF1Q9BQI6 1058 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 FBXO28Q9NVF7 368 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 UCKL1Q9NWZ5 548 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 SORCS3Q9UPU3 1222 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 RIPK3Q9Y572 518 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 B3GALT1Q9Y5Z6 326 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 ZNF292O60281 2723 aa6.94□□□□□ -1.3
ATXN3-223ENST00000553686 MYO15AQ9UKN7 3530 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 LINC01565O15544 149 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 NBNO60934 754 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 RFPL3O75679 317 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 ADRB1P08588 477 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 MC4RP32245 332 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 CTNNB1P35222 781 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 PLCD1P51178 756 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 PPP2CBP62714 309 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 DYNLL1P63167 89 aaKnown RBP6.93□□□□□ -1.3
ATXN3-223ENST00000553686 PPP2CAP67775 309 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 EXOSC9Q06265 439 aaKnown RBP6.93□□□□□ -1.3
ATXN3-223ENST00000553686 GABPAQ06546 454 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 SURF1Q15526 300 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 ARHGAP44Q17R89 818 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 C21orf62-AS1Q17RA5 79 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 DUSP28Q4G0W2 176 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 TM4SF20Q53R12 229 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 TMED8Q6PL24 325 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-223ENST00000553686 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATXN3-223ENST00000553686 HOMER1Q86YM7 354 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 TOP1MTQ969P6 601 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 AJUBAQ96IF1 538 aa6.93□□□□□ -1.3
ATXN3-223ENST00000553686 CCDC17Q96LX7 622 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms