RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 NDRG2Q9UN36 371 aaKnown RBP16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 L1RE1Q9UN81 338 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 PCDHGA2Q9Y5H1 932 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 SNX9Q9Y5X1 595 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 OTOGLQ3ZCN5 2332 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 TPRP12270 2363 aaKnown RBP16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 NCANO14594 1321 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 SHISA7A6NL88 538 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 PRPF40AO75400 957 aaKnown RBP16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 CSH1P0DML2 217 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 CSH2P0DML3 217 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 DDX6P26196 483 aaKnown RBP eCLIP16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 ME1P48163 572 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 LHX1P48742 406 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 RPL10AP62906 217 aaKnown RBP16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 PLCB2Q00722 1185 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 CSTF1Q05048 431 aaKnown RBP16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 DUOXA2Q1HG44 320 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 INTS6LQ5JSJ4 861 aaKnown RBP16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 FOXD4L5Q5VV16 416 aaPredicted RBP16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 UNC13DQ70J99 1090 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 EPM2AIP1Q7L775 607 aaPredicted RBP16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 DPH6Q7L8W6 267 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 WDR49Q8IV35 697 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 ADGRF2Q8IZF7 708 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 CXorf38Q8TB03 319 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 ZNF507Q8TCN5 953 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 GIPC2Q8TF65 315 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 FOXD4L4Q8WXT5 416 aaPredicted RBP16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 RSPRY1Q96DX4 576 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 FAM126AQ9BYI3 521 aaPredicted RBP16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 CHRDQ9H2X0 955 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 IL21Q9HBE4 155 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 PRMT8Q9NR22 394 aaPredicted RBP16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 HSPBP1Q9NZL4 362 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 SIX4Q9UIU6 781 aa16.25■□□□□ 0.19
SDR39U1-205ENST00000553546 SOBPA7XYQ1 873 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 POLR2DO15514 142 aaKnown RBP16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 KPNA1P52294 538 aaPredicted RBP16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 CYP4F8P98187 520 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 FZD5Q13467 585 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 MAMSTRQ6ZN01 415 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 HS2ST1Q7LGA3 356 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 CBWD2Q8IUF1 395 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 ZNF687Q8N1G0 1237 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 GLIS3Q8NEA6 775 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 BPIFB1Q8TDL5 484 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 ATRIPQ8WXE1 791 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 HPS3Q969F9 1004 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 AGPAT3Q9NRZ7 376 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 THG1LQ9NWX6 298 aaKnown RBP16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 ZSCAN32Q9NX65 697 aa16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 CGNQ9P2M7 1197 aaKnown RBP16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 UXTQ9UBK9 157 aaPredicted RBP16.24■□□□□ 0.19
SDR39U1-205ENST00000553546 DENND4CQ5VZ89 1909 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 PVALEFA0A1B0GWK0 134 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 GABRDO14764 452 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 CCNE1P24864 410 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 AVPR1AP37288 418 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 NLRP12P59046 1061 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 MTAPQ13126 283 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 LRRC32Q14392 662 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 SNRNP35Q16560 246 aaKnown RBP16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 FOXD4L6Q3SYB3 417 aaPredicted RBP16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 CFAP221Q4G0U5 840 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 RESP18Q5W5W9 173 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 FOXD4L3Q6VB84 417 aaPredicted RBP16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 RALGPS2Q86X27 583 aaPredicted RBP16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 CMTM8Q8IZV2 173 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 CELF5Q8N6W0 485 aaKnown RBP16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 MRPS31Q92665 395 aaKnown RBP16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 FUBP3Q96I24 572 aaKnown RBP eCLIP16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 HPDLQ96IR7 371 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 PI4K2AQ9BTU6 479 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 KIF9Q9HAQ2 790 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 TMLHEQ9NVH6 421 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 PCDHA7Q9UN72 937 aa16.23■□□□□ 0.19
SDR39U1-205ENST00000553546 SLC38A8A6NNN8 435 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 PRAMEF12O95522 483 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 HMGA1P17096 107 aaKnown RBP16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 ACAT1P24752 427 aaKnown RBP16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 HOXD13P35453 343 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 CCR3P51677 355 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 CDR1P51861 262 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 NRLP54845 237 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 EHHADHQ08426 723 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 MAPRE1Q15691 268 aaKnown RBP16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 SOWAHAQ2M3V2 549 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 LMBRD2Q68DH5 695 aaPredicted RBP16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 C4orf50Q6ZRC1 276 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 SPATA2LQ8IUW3 424 aaPredicted RBP16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 CEP57L1Q8IYX8 460 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 XXYLT1Q8NBI6 393 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 ZBTB44Q8NCP5 570 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 OR5B17Q8NGF7 314 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 RUBCNQ92622 972 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 NELL1Q92832 810 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 TRMT2BQ96GJ1 504 aaKnown RBP16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 FNBP1Q96RU3 617 aa16.22■□□□□ 0.19
SDR39U1-205ENST00000553546 PKMYT1Q99640 499 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms