RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 OR6B3Q8NGW1 331 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 PSMG2Q969U7 264 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 SYAP1Q96A49 352 aaPredicted RBP25.26■■□□□ 1.63
TDP1-205ENST00000553527 MMRN2Q9H8L6 949 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 ZNF334Q9HCZ1 680 aaPredicted RBP25.26■■□□□ 1.63
TDP1-205ENST00000553527 CA14Q9ULX7 337 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 ASB3Q9Y575 518 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 STK25O00506 426 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 CYP2F1P24903 491 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 GNL1P36915 607 aaPredicted RBP25.25■■□□□ 1.63
TDP1-205ENST00000553527 GPR15P49685 360 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 EPHA5P54756 1037 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 GPC5P78333 572 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 CLDN10P78369 228 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 NCOA4Q13772 614 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 SDHAF4Q5VUM1 108 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 TMC8Q8IU68 726 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 SPATA2LQ8IUW3 424 aaPredicted RBP25.25■■□□□ 1.63
TDP1-205ENST00000553527 GPIHBP1Q8IV16 184 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 FAM186BQ8IYM0 893 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 SIX5Q8N196 739 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 TRIML1Q8N9V2 468 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 STKLD1Q8NE28 680 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 FLCNQ8NFG4 579 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 SHKBP1Q8TBC3 707 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 SPATA18Q8TC71 538 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 TMC2Q8TDI7 906 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 SYT15Q9BQS2 421 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 LRRC3Q9BY71 257 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 PLA2G2FQ9BZM2 168 aa25.25■■□□□ 1.63
TDP1-205ENST00000553527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.25■■□□□ 1.632e-9■■■■■ 223.6
TDP1-205ENST00000553527 KRT13P13646 458 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 WARSP23381 471 aaKnown RBP25.24■■□□□ 1.63
TDP1-205ENST00000553527 GABRR2P28476 465 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 ATICP31939 592 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 PSMC2P35998 433 aaKnown RBP25.24■■□□□ 1.63
TDP1-205ENST00000553527 MORC3Q14149 939 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 NFKBIBQ15653 356 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 NFIL3Q16649 462 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 ZNF699Q32M78 642 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 FAM78AQ5JUQ0 283 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 TANGO2Q6ICL3 276 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 CAVIN1Q6NZI2 390 aaKnown RBP25.24■■□□□ 1.63
TDP1-205ENST00000553527 LIMS2Q7Z4I7 341 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 XYLT2Q9H1B5 865 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 ATXN3LQ9H3M9 355 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 CDH9Q9ULB4 789 aa25.24■■□□□ 1.63
TDP1-205ENST00000553527 MICAL2O94851 1124 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 VNN1O95497 513 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 TRIM49P0CI25 452 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 TRIM49CP0CI26 452 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 VCPP55072 806 aaKnown RBP25.23■■□□□ 1.63
TDP1-205ENST00000553527 CDH8P55286 799 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 DDR2Q16832 855 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 SKOR2Q2VWA4 1001 aaPredicted RBP25.23■■□□□ 1.63
TDP1-205ENST00000553527 SCN4BQ8IWT1 228 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 PKMYT1Q99640 499 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 ZFP14Q9HCL3 533 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 TMEM63CQ9P1W3 806 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 MAGED2Q9UNF1 606 aaPredicted RBP25.23■■□□□ 1.63
TDP1-205ENST00000553527 ZNF638Q14966 1978 aaKnown RBP25.23■■□□□ 1.63
TDP1-205ENST00000553527 WDFY4Q6ZS81 3184 aa25.23■■□□□ 1.63
TDP1-205ENST00000553527 RAP1GAPP47736 663 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 CYP27A1Q02318 531 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 STIM1Q13586 685 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 ZCWPW2Q504Y3 356 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 ZNF667Q5HYK9 610 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 C1orf220Q5T0J3 134 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 STXBP5Q5T5C0 1151 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 SCARA5Q6ZMJ2 495 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 INTS8Q75QN2 995 aaKnown RBP25.22■■□□□ 1.63
TDP1-205ENST00000553527 GAREM2Q75VX8 874 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 SV2AQ7L0J3 742 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 ZSCAN18Q8TBC5 510 aaPredicted RBP25.22■■□□□ 1.63
TDP1-205ENST00000553527 TSG101Q99816 390 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 CRTAC1Q9NQ79 661 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 WNT16Q9UBV4 365 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 ZDBF2Q9HCK1 2354 aa25.22■■□□□ 1.63
TDP1-205ENST00000553527 ZNF318Q5VUA4 2279 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 IKBKBO14920 756 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 CETN3O15182 167 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 MAPK13O15264 365 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 TACC1O75410 805 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 RFX1P22670 979 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 AVPR2P30518 371 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 GCLMP48507 274 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 EDRF1Q3B7T1 1238 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 ZACNQ401N2 412 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 COBLL1Q53SF7 1204 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 IER5LQ5T953 404 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 ANKRD40Q6AI12 368 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 FAM171BQ6P995 826 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 RBM43Q6ZSC3 357 aaKnown RBP25.21■■□□□ 1.63
TDP1-205ENST00000553527 ASB16Q96NS5 453 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 SMYD3Q9H7B4 428 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 MAGEC2Q9UBF1 373 aaPredicted RBP25.21■■□□□ 1.63
TDP1-205ENST00000553527 NME7Q9Y5B8 376 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 KMT2EQ8IZD2 1858 aa25.21■■□□□ 1.63
TDP1-205ENST00000553527 DENND4CQ5VZ89 1909 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 KRBA1A5PL33 1030 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms