RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NAPAP54920 295 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 UCNP55089 124 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 WNT7BP56706 349 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ROR1Q01973 937 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 TNK2Q07912 1038 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 LAMTOR4Q0VGL1 99 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 TWF1Q12792 350 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 PDGFRLQ15198 375 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 RTN1Q16799 776 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 C11orf91Q3C1V1 193 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ZNF394Q53GI3 561 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 PRR16Q569H4 304 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 SYCP2LQ5T4T6 812 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 C6orf118Q5T5N4 469 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 BROXQ5VW32 411 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 PEAR1Q5VY43 1037 aaPredicted RBP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 WWC2Q6AWC2 1192 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ANO7Q6IWH7 933 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 SLC27A1Q6PCB7 646 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 CYB5R4Q7L1T6 521 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 OTUD6AQ7L8S5 288 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ITIH5Q86UX2 942 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ATCAYQ86WG3 371 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 TMPRSS12Q86WS5 348 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 TTC30AQ86WT1 665 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ETFBKMTQ8IXQ9 262 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 PGBD3Q8N328 593 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 SRBD1Q8N5C6 995 aaKnown RBP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 RNF149Q8NC42 400 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 NCOA7Q8NI08 942 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 SHKBP1Q8TBC3 707 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 WHAMMQ8TF30 809 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 RILPL2Q969X0 211 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 MED8Q96G25 268 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 UROC1Q96N76 676 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 CDK15Q96Q40 435 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 FAM83CQ9BQN1 747 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 OXCT2Q9BYC2 517 aaPredicted RBP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 TPSD1Q9BZJ3 242 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 TASP1Q9H6P5 420 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 CEP72Q9P209 647 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 BCCIPQ9P287 314 aaKnown RBP eCLIP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 AFF4Q9UHB7 1163 aaKnown RBP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 GOLGA4Q13439 2230 aaKnown RBP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 COL6A6A6NMZ7 2263 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 BAZ2BQ9UIF8 2168 aaKnown RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 ABCA12Q86UK0 2595 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 IGLV3-22A0A075B6J6 115 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 CCDC69A6NI79 296 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 TMEM189-UBE2V1I3L0A0 370 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 hCG_1984214I3L0E3 225 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 SYN3O14994 580 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 MARCH6O60337 910 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 EIF5BO60841 1220 aaKnown RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 LILRA1O75019 489 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 CBFA2T3O75081 653 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 KIF4AO95239 1232 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 SEC24AO95486 1093 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 RPLP1P05386 114 aaKnown RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 ATF4P18848 351 aaPredicted RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 P2RY2P41231 377 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 EMP3P54852 163 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 RIPPLY3P57055 190 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 PTENP60484 403 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 PSMC5P62195 406 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 CXADRP78310 365 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 MRPS21P82921 87 aaKnown RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 SEMG2Q02383 582 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 ZNF33AQ06730 810 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 TEAD4Q15561 434 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 SMAD1Q15797 465 aaKnown RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 TAF12Q16514 161 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 CRY1Q16526 586 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 PLEKHG6Q3KR16 790 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 HSF5Q4G112 596 aaPredicted RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 PKDCCQ504Y2 493 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 GPR158Q5T848 1215 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 IL27RAQ6UWB1 636 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 SYNE3Q6ZMZ3 975 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 NFXL1Q6ZNB6 911 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 ARMCX6Q7L4S7 300 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 VASH1Q7L8A9 365 aaPredicted RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 MIER3Q7Z3K6 550 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 ZNF295-AS1Q8N0V1 137 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 ZNF713Q8N859 430 aaPredicted RBP5.67□□□□□ -1.5
CKAP4-203ENST00000553039 DAGLBQ8NCG7 672 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 APPL2Q8NEU8 664 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 OLIG1Q8TAK6 271 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 IGDCC4Q8TDY8 1250 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 EDEM1Q92611 657 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 CD101Q93033 1021 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 NXPE2Q96DL1 559 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 RSPRY1Q96DX4 576 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 CPB2Q96IY4 423 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 CEP170P1Q96L14 293 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 LRRC3BQ96PB8 259 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 FNBP1Q96RU3 617 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 CEP89Q96ST8 783 aa5.67□□□□□ -1.5
CKAP4-203ENST00000553039 PAAF1Q9BRP4 392 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms