RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 CFAP47Q6ZTR5 3102 aa18.25■□□□□ 0.51
CACNB3-222ENST00000552465 DMC1Q14565 340 aa18.25■□□□□ 0.51
CACNB3-222ENST00000552465 ZNF268Q14587 947 aaPredicted RBP18.25■□□□□ 0.51
CACNB3-222ENST00000552465 KARSQ15046 597 aaKnown RBP18.25■□□□□ 0.51
CACNB3-222ENST00000552465 DAB2IPQ5VWQ8 1189 aa18.25■□□□□ 0.51
CACNB3-222ENST00000552465 WSCD1Q658N2 575 aa18.25■□□□□ 0.51
CACNB3-222ENST00000552465 DCP1BQ8IZD4 617 aaKnown RBP18.25■□□□□ 0.51
CACNB3-222ENST00000552465 KDF1Q8NAX2 398 aaPredicted RBP18.25■□□□□ 0.51
CACNB3-222ENST00000552465 EZH1Q92800 747 aaPredicted RBP18.25■□□□□ 0.51
CACNB3-222ENST00000552465 EXOC4Q96A65 974 aa18.25■□□□□ 0.51
CACNB3-222ENST00000552465 ECT2Q9H8V3 914 aa18.25■□□□□ 0.51
CACNB3-222ENST00000552465 WASF3Q9UPY6 502 aa18.25■□□□□ 0.51
CACNB3-222ENST00000552465 SCP2P22307 547 aa18.24■□□□□ 0.51
CACNB3-222ENST00000552465 TAF6P49848 677 aa18.24■□□□□ 0.51
CACNB3-222ENST00000552465 SLC39A4Q6P5W5 647 aa18.24■□□□□ 0.51
CACNB3-222ENST00000552465 CPA6Q8N4T0 437 aa18.24■□□□□ 0.51
CACNB3-222ENST00000552465 MRPS31Q92665 395 aaKnown RBP18.24■□□□□ 0.51
CACNB3-222ENST00000552465 CD101Q93033 1021 aa18.24■□□□□ 0.51
CACNB3-222ENST00000552465 CCSER1Q9C0I3 900 aa18.24■□□□□ 0.51
CACNB3-222ENST00000552465 ASB7Q9H672 318 aa18.24■□□□□ 0.51
CACNB3-222ENST00000552465 ODF2LQ9ULJ1 636 aa18.24■□□□□ 0.51
CACNB3-222ENST00000552465 PCDHB5Q9Y5E4 795 aa18.24■□□□□ 0.51
CACNB3-222ENST00000552465 KIF26AQ9ULI4 1882 aaPredicted RBP18.24■□□□□ 0.51
CACNB3-222ENST00000552465 LNP1A1A4G5 178 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 GPR15P49685 360 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 ACOT2P49753 483 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 ATP2C1P98194 919 aaPredicted RBP18.23■□□□□ 0.51
CACNB3-222ENST00000552465 ZNF252P-AS1Q0IIN9 211 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 FOXC1Q12948 553 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 TMEM119Q4V9L6 283 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 SH3PXD2AQ5TCZ1 1133 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 MYCT1Q8N699 235 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 ACDQ96AP0 544 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 CDK5RAP3Q96JB5 506 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 REEP2Q9BRK0 252 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 TMLHEQ9NVH6 421 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 DUS2Q9NX74 493 aaKnown RBP18.23■□□□□ 0.51
CACNB3-222ENST00000552465 DPP3Q9NY33 737 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 MAGED2Q9UNF1 606 aaPredicted RBP18.23■□□□□ 0.51
CACNB3-222ENST00000552465 C2CD2Q9Y426 696 aa18.23■□□□□ 0.51
CACNB3-222ENST00000552465 SPAG17Q6Q759 2223 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 K7ENM7 598 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 PRPF40AO75400 957 aaKnown RBP18.22■□□□□ 0.51
CACNB3-222ENST00000552465 CSH1P0DML2 217 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 CSH2P0DML3 217 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 GBP1P32455 592 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 DGKEP52429 567 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 PSMD2Q13200 908 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 MTF1Q14872 753 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 OSCP1Q8WVF1 389 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 ZSCAN31Q96LW9 406 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-222ENST00000552465 PI4K2AQ9BTU6 479 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 TMEM121BQ9BXQ6 578 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-222ENST00000552465 INVSQ9Y283 1065 aa18.22■□□□□ 0.51
CACNB3-222ENST00000552465 VWA3AA6NCI4 1184 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 KPNA7A9QM74 516 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 ANKRD63C9JTQ0 380 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 KHNYNO15037 678 aaKnown RBP18.21■□□□□ 0.51
CACNB3-222ENST00000552465 TRAK2O60296 914 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 FAM13AO94988 1023 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 CEACAM1P13688 526 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 SPINK2P20155 84 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 CSRP1P21291 193 aaKnown RBP18.21■□□□□ 0.51
CACNB3-222ENST00000552465 ZNF131P52739 623 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 FAM160A1Q05DH4 1040 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 COL9A2Q14055 689 aaPredicted RBP18.21■□□□□ 0.51
CACNB3-222ENST00000552465 USP39Q53GS9 565 aaKnown RBP18.21■□□□□ 0.51
CACNB3-222ENST00000552465 SDHAF4Q5VUM1 108 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 PMS2CLQ68D20 193 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 C11orf74Q86VG3 221 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 GPBP1Q86WP2 473 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 TSTD1Q8NFU3 115 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 CYP2S1Q96SQ9 504 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 PARVGQ9HBI0 331 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 TMEM9BQ9NQ34 198 aa18.21■□□□□ 0.51
CACNB3-222ENST00000552465 CDX4O14627 284 aaPredicted RBP18.2■□□□□ 0.5
CACNB3-222ENST00000552465 TADA3O75528 432 aa18.2■□□□□ 0.5
CACNB3-222ENST00000552465 TOP3BO95985 862 aaKnown RBP18.2■□□□□ 0.5
CACNB3-222ENST00000552465 GTF2BQ00403 316 aa18.2■□□□□ 0.5
CACNB3-222ENST00000552465 TSPY1Q01534 308 aa18.2■□□□□ 0.5
CACNB3-222ENST00000552465 ZNF77Q15935 545 aa18.2■□□□□ 0.5
CACNB3-222ENST00000552465 NFE2Q16621 373 aaPredicted RBP18.2■□□□□ 0.5
CACNB3-222ENST00000552465 DDR2Q16832 855 aa18.2■□□□□ 0.5
CACNB3-222ENST00000552465 RILPL1Q5EBL4 403 aa18.2■□□□□ 0.5
CACNB3-222ENST00000552465 ADALQ6DHV7 355 aa18.2■□□□□ 0.5
CACNB3-222ENST00000552465 ATP2A3Q93084 1043 aa18.2■□□□□ 0.5
CACNB3-222ENST00000552465 ADAM33Q9BZ11 813 aa18.2■□□□□ 0.5
CACNB3-222ENST00000552465 UXTQ9UBK9 157 aaPredicted RBP18.2■□□□□ 0.5
CACNB3-222ENST00000552465 WNT6Q9Y6F9 365 aa18.2■□□□□ 0.5
CACNB3-222ENST00000552465 TSC2P49815 1807 aa18.19■□□□□ 0.5
CACNB3-222ENST00000552465 EML5Q05BV3 1969 aa18.19■□□□□ 0.5
CACNB3-222ENST00000552465 TISP43B9A030 160 aa18.19■□□□□ 0.5
CACNB3-222ENST00000552465 NOL4O94818 638 aa18.19■□□□□ 0.5
CACNB3-222ENST00000552465 USP17L7P0C7H9 530 aa18.19■□□□□ 0.5
CACNB3-222ENST00000552465 IFNAR2P48551 515 aa18.19■□□□□ 0.5
CACNB3-222ENST00000552465 RPL10AP62906 217 aaKnown RBP18.19■□□□□ 0.5
CACNB3-222ENST00000552465 POU5F1Q01860 360 aaKnown RBP18.19■□□□□ 0.5
CACNB3-222ENST00000552465 NR1H3Q13133 447 aa18.19■□□□□ 0.5
CACNB3-222ENST00000552465 EML3Q32P44 896 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms