RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ADAM2Q99965 735 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 PAAF1Q9BRP4 392 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 STARD7Q9NQZ5 370 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 TAF6P49848 677 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 FAM26DQ5JW98 314 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 JOSD2Q8TAC2 188 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 UNC93B1Q9H1C4 597 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 ARFGAP3Q9NP61 516 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 ESYT3A0FGR9 886 aa20.84■□□□□ 0.93
SSH1-209ENST00000551165 CCDC66A2RUB6 948 aa20.84■□□□□ 0.93
SSH1-209ENST00000551165 A8MXQ7 604 aa20.84■□□□□ 0.93
SSH1-209ENST00000551165 XPOTO43592 962 aaKnown RBP20.84■□□□□ 0.93
SSH1-209ENST00000551165 PDCLQ13371 301 aa20.84■□□□□ 0.93
SSH1-209ENST00000551165 GOLGA7BQ2TAP0 167 aa20.84■□□□□ 0.93
SSH1-209ENST00000551165 LCLAT1Q6UWP7 414 aa20.84■□□□□ 0.93
SSH1-209ENST00000551165 TTC30AQ86WT1 665 aa20.84■□□□□ 0.93
SSH1-209ENST00000551165 GDAP2Q9NXN4 497 aa20.84■□□□□ 0.93
SSH1-209ENST00000551165 F8VP50 259 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 LRPAP1P30533 357 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 RFC1P35251 1148 aaPredicted RBP20.83■□□□□ 0.93
SSH1-209ENST00000551165 PSMC1P62191 440 aaKnown RBP20.83■□□□□ 0.93
SSH1-209ENST00000551165 PPP1R2P3Q6NXS1 205 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 OSTM1Q86WC4 334 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 XYLT1Q86Y38 959 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 C3orf58Q8NDZ4 430 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 C18orf8Q96DM3 657 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 GDAP1L1Q96MZ0 367 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 HERPUD2Q9BSE4 406 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 TSEN34Q9BSV6 310 aaKnown RBP20.83■□□□□ 0.93
SSH1-209ENST00000551165 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.83■□□□□ 0.93
SSH1-209ENST00000551165 SART1O43290 800 aaKnown RBP20.83■□□□□ 0.93
SSH1-209ENST00000551165 CLCNKBP51801 687 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 RWDD2BP57060 319 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 CCNI2Q6ZMN8 369 aaPredicted RBP20.83■□□□□ 0.93
SSH1-209ENST00000551165 MRPL10Q7Z7H8 261 aaKnown RBP20.83■□□□□ 0.93
SSH1-209ENST00000551165 EMC1Q8N766 993 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 SLC43A3Q8NBI5 491 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 C3orf20Q8ND61 904 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 DDX27Q96GQ7 796 aaKnown RBP20.83■□□□□ 0.93
SSH1-209ENST00000551165 ZNF560Q96MR9 790 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 TSPYL2Q9H2G4 693 aaPredicted RBP20.83■□□□□ 0.93
SSH1-209ENST00000551165 ST7Q9NRC1 585 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 STIM2Q9P246 746 aa20.83■□□□□ 0.93
SSH1-209ENST00000551165 SPDYE4A6NLX3 237 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 GJC1P36383 396 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 RGS7P49802 495 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 MTFR1Q15390 333 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 ATP13A4Q4VNC1 1196 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 DCUN1D2Q6PH85 259 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 LIMS2Q7Z4I7 341 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 MTERF4Q7Z6M4 381 aaKnown RBP20.82■□□□□ 0.92
SSH1-209ENST00000551165 HNRNPLLQ8WVV9 542 aaKnown RBP20.82■□□□□ 0.92
SSH1-209ENST00000551165 PIWIL1Q96J94 861 aaKnown RBP20.82■□□□□ 0.92
SSH1-209ENST00000551165 AMACRQ9UHK6 382 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 HEXIM1O94992 359 aaKnown RBP20.82■□□□□ 0.92
SSH1-209ENST00000551165 POMCP01189 267 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 RPLP2P05387 115 aaKnown RBP20.82■□□□□ 0.92
SSH1-209ENST00000551165 THP07101 528 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 CCDC130P13994 396 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 GNL1P36915 607 aaPredicted RBP20.82■□□□□ 0.92
SSH1-209ENST00000551165 SLC1A1P43005 524 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 SSR1P43307 286 aaKnown RBP20.82■□□□□ 0.92
SSH1-209ENST00000551165 SMYD5Q6GMV2 418 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 ANKS1BQ7Z6G8 1248 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 RTN4RL1Q86UN2 441 aaPredicted RBP20.82■□□□□ 0.92
SSH1-209ENST00000551165 APPL2Q8NEU8 664 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 TSPAN18Q96SJ8 248 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 SYNCQ9H7C4 482 aa20.82■□□□□ 0.92
SSH1-209ENST00000551165 A0A0U1RQF3 1178 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 CASTOR2A6NHX0 329 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 ATP2C2O75185 946 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 GABBR2O75899 941 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 PNPLA4P41247 253 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 GUCY2DQ02846 1103 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 SV2CQ496J9 727 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 TXNRD3NBQ6F5E7 133 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 PMF1Q6P1K2 205 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 TTC39CQ8N584 583 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 FUT8Q9BYC5 575 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 KLHL11Q9NVR0 708 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 SAGE1Q9NXZ1 904 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 PKDCCQ504Y2 493 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 CCDC70Q6NSX1 233 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 FAM124BQ9H5Z6 455 aaPredicted RBP20.81■□□□□ 0.92
SSH1-209ENST00000551165 EPB41L5Q9HCM4 733 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 METTL5Q9NRN9 209 aaKnown RBP20.81■□□□□ 0.92
SSH1-209ENST00000551165 IP6K2Q9UHH9 426 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 KIAA1257Q9ULG3 409 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 GIT1Q9Y2X7 761 aa20.81■□□□□ 0.92
SSH1-209ENST00000551165 E5RJQ4 531 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 ZNF623O75123 536 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 KRT3P12035 628 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 ACAT1P24752 427 aaKnown RBP20.8■□□□□ 0.92
SSH1-209ENST00000551165 SEL1L2Q5TEA6 688 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 WSCD1Q658N2 575 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 ADGRF2Q8IZF7 708 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 PRELID2Q8N945 189 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.8■□□□□ 0.92
SSH1-209ENST00000551165 STRIP2Q9ULQ0 834 aa20.8■□□□□ 0.92
SSH1-209ENST00000551165 TIMM13Q9Y5L4 95 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms