RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SDHAF4Q5VUM1 108 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 MAML2Q8IZL2 1156 aaPredicted RBP13.99□□□□□ -0.17
NPAS3-209ENST00000551008 THEM5Q8N1Q8 247 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 TMEM86AQ8N2M4 240 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
NPAS3-209ENST00000551008 RIN3Q8TB24 985 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 SPATA18Q8TC71 538 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 C2orf15Q8WU43 125 aaKnown RBP13.99□□□□□ -0.17
NPAS3-209ENST00000551008 HPDLQ96IR7 371 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 ACBD6Q9BR61 282 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 PI4K2AQ9BTU6 479 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 ZFP14Q9HCL3 533 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 CRTAC1Q9NQ79 661 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 HEBP1Q9NRV9 189 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 GTF3C4Q9UKN8 822 aa13.99□□□□□ -0.17
NPAS3-209ENST00000551008 OTOGLQ3ZCN5 2332 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 WDR87Q6ZQQ6 2873 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 MYO16Q9Y6X6 1858 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 A0A1W2PQ27 194 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 A0A1W2PQ64 194 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 A0A1W2PQD8 194 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 KANSL1LA0AUZ9 987 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 MYBPHLA2RUH7 354 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 HEPACAM2A8MVW5 462 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 PROB1E7EW31 1015 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 TULP1O00294 542 aaPredicted RBP13.98□□□□□ -0.17
NPAS3-209ENST00000551008 TNNC2P02585 160 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 F11P03951 625 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 DLATP10515 647 aaKnown RBP13.98□□□□□ -0.17
NPAS3-209ENST00000551008 CYP2F1P24903 491 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 NBL1P41271 181 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 SYKP43405 635 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 TUFMP49411 452 aaKnown RBP13.98□□□□□ -0.17
NPAS3-209ENST00000551008 PRKCQQ04759 706 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 SMARCB1Q12824 385 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 DPYDQ12882 1025 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 ANGPT1Q15389 498 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 SURF1Q15526 300 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 WDR44Q5JSH3 913 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 C1orf220Q5T0J3 134 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 FAM171BQ6P995 826 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 HS2ST1Q7LGA3 356 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 FSIP1Q8NA03 581 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 TMEM174Q8WUU8 243 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 DNASE1L2Q92874 299 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 ELMO3Q96BJ8 720 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 CCDC127Q96BQ5 260 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 MRPL45Q9BRJ2 306 aaKnown RBP13.98□□□□□ -0.17
NPAS3-209ENST00000551008 LTB4R2Q9NPC1 389 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 EXOC1Q9NV70 894 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 TMEM30AQ9NV96 361 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 USP25Q9UHP3 1055 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 SIT1Q9Y3P8 196 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 PCDHB5Q9Y5E4 795 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 GPR179Q6PRD1 2367 aa13.98□□□□□ -0.17
NPAS3-209ENST00000551008 PTPRZ1P23471 2315 aaPredicted RBP13.98□□□□□ -0.17
NPAS3-209ENST00000551008 KIAA1549LQ6ZVL6 1849 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 MYH10P35580 1976 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 LRRIQ3A6PVS8 624 aaPredicted RBP13.97□□□□□ -0.17
NPAS3-209ENST00000551008 VNN1O95497 513 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 RPN1P04843 607 aaKnown RBP13.97□□□□□ -0.17
NPAS3-209ENST00000551008 PSMC3P17980 439 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 WARSP23381 471 aaKnown RBP13.97□□□□□ -0.17
NPAS3-209ENST00000551008 GDI1P31150 447 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 NLRP12P59046 1061 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 PSMC1P62191 440 aaKnown RBP13.97□□□□□ -0.17
NPAS3-209ENST00000551008 DLG4P78352 724 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 CLDN10P78369 228 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 TSPY1Q01534 308 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 PFKPQ01813 784 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 FCHO2Q0JRZ9 810 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 DDR2Q16832 855 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 GPR158Q5T848 1215 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 TDRD10Q5VZ19 366 aaKnown RBP13.97□□□□□ -0.17
NPAS3-209ENST00000551008 KRBA2Q6ZNG9 492 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 TPRG1Q6ZUI0 275 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 SLC9A9Q8IVB4 645 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 ARID3BQ8IVW6 561 aaPredicted RBP13.97□□□□□ -0.17
NPAS3-209ENST00000551008 MFSD6LQ8IWD5 586 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 DCP1BQ8IZD4 617 aaKnown RBP13.97□□□□□ -0.17
NPAS3-209ENST00000551008 PARD3BQ8TEW8 1205 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 ATOH1Q92858 354 aaPredicted RBP13.97□□□□□ -0.17
NPAS3-209ENST00000551008 TRMT61BQ9BVS5 477 aaKnown RBP13.97□□□□□ -0.17
NPAS3-209ENST00000551008 ATXN3LQ9H3M9 355 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 ABCB6Q9NP58 842 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 CGNQ9P2M7 1197 aaKnown RBP13.97□□□□□ -0.17
NPAS3-209ENST00000551008 ATG2BQ96BY7 2078 aa13.97□□□□□ -0.17
NPAS3-209ENST00000551008 EP300Q09472 2414 aaPredicted RBP13.96□□□□□ -0.17
NPAS3-209ENST00000551008 STK25O00506 426 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 PRPF40AO75400 957 aaKnown RBP13.96□□□□□ -0.17
NPAS3-209ENST00000551008 RHOBTB3O94955 611 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 STAU1O95793 577 aaKnown RBP13.96□□□□□ -0.17
NPAS3-209ENST00000551008 TNNI1P19237 187 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 LHX1P48742 406 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 MYL6P60660 151 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 MYL7Q01449 175 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 NFE2Q16621 373 aaPredicted RBP13.96□□□□□ -0.17
NPAS3-209ENST00000551008 CFAP221Q4G0U5 840 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 DPH6Q7L8W6 267 aa13.96□□□□□ -0.17
NPAS3-209ENST00000551008 ASCL5Q7RTU5 278 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms