RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 NCANO14594 1321 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 HRO43593 1189 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 PRPF40AO75400 957 aaKnown RBP15.3■□□□□ 0.04
TPCN1-213ENST00000550543 SOAT2O75908 522 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 PRAMEF12O95522 483 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 COL4A2P08572 1712 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 TPRP12270 2363 aaKnown RBP15.3■□□□□ 0.04
TPCN1-213ENST00000550543 LIMK1P53667 647 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 RBP5P82980 135 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 CYP4F8P98187 520 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
TPCN1-213ENST00000550543 ZC2HC1CQ53FD0 456 aaPredicted RBP15.3■□□□□ 0.04
TPCN1-213ENST00000550543 TMEM196Q5HYL7 178 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 L1TD1Q5T7N2 865 aaKnown RBP15.3■□□□□ 0.04
TPCN1-213ENST00000550543 HEATR6Q6AI08 1181 aaKnown RBP15.3■□□□□ 0.04
TPCN1-213ENST00000550543 TXNDC11Q6PKC3 985 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 C4orf50Q6ZRC1 276 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 TICRRQ7Z2Z1 1910 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 C11orf74Q86VG3 221 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 SFR1Q86XK3 245 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 BRSK2Q8IWQ3 736 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 TOP6BLQ8N6T0 577 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 C12orf50Q8NA57 414 aaPredicted RBP15.3■□□□□ 0.04
TPCN1-213ENST00000550543 GIPC2Q8TF65 315 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 GAB3Q8WWW8 586 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 ACDQ96AP0 544 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 ZFYVE19Q96K21 471 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 FAM83CQ9BQN1 747 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 PARD6AQ9NPB6 346 aa15.3■□□□□ 0.04
TPCN1-213ENST00000550543 RBM12Q9NTZ6 932 aaKnown RBP15.3■□□□□ 0.04
TPCN1-213ENST00000550543 TRAV19A0A0A6YYK7 116 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.29■□□□□ 0.04
TPCN1-213ENST00000550543 RPP40O75818 363 aaKnown RBP15.29■□□□□ 0.04
TPCN1-213ENST00000550543 PPP1R37O75864 691 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 GCNT3O95395 438 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 USP17L7P0C7H9 530 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 CCDC192P0DO97 292 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 FAM160A1Q05DH4 1040 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 CFAP221Q4G0U5 840 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 Q6ZS52 159 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 DPH6Q7L8W6 267 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 KIAA1958Q8N8K9 716 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 MAB21L3Q8N8X9 362 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 ATP2A3Q93084 1043 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 MYRFLQ96LU7 910 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 LRRC3BQ96PB8 259 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 FAM213AQ9BRX8 229 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 GDAP2Q9NXN4 497 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 DDX43Q9NXZ2 648 aaKnown RBP15.29■□□□□ 0.04
TPCN1-213ENST00000550543 RBAKQ9NYW8 714 aaPredicted RBP15.29■□□□□ 0.04
TPCN1-213ENST00000550543 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
TPCN1-213ENST00000550543 SRPRBQ9Y5M8 271 aaKnown RBP15.29■□□□□ 0.04
TPCN1-213ENST00000550543 MORC2Q9Y6X9 1032 aaPredicted RBP15.29■□□□□ 0.04
TPCN1-213ENST00000550543 DCDC2BA2VCK2 349 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 VPS37CA5D8V6 355 aaPredicted RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 EXTL3O43909 919 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 NOL4O94818 638 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 F11P03951 625 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 CENPBP07199 599 aaPredicted RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 ADRB1P08588 477 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 TMEM191BP0C7N4 346 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 HMGA1P17096 107 aaKnown RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 POLR2BP30876 1174 aaKnown RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 TNK2Q07912 1038 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 AASDHQ4L235 1098 aaPredicted RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 INTS6LQ5JSJ4 861 aaKnown RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 DYMQ7RTS9 669 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 SPATA2LQ8IUW3 424 aaPredicted RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 EFCAB13Q8IY85 973 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 PDCL2Q8N4E4 241 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 FAM160A2Q8N612 972 aaPredicted RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 TTC8Q8TAM2 541 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 USP13Q92995 863 aaPredicted RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 ANKRD36BP1Q96IX9 119 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 P2RY13Q9BPV8 354 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 STRA6Q9BX79 667 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 KIAA1586Q9HCI6 787 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 MAGED2Q9UNF1 606 aaPredicted RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 NUP210Q8TEM1 1887 aaPredicted RBP15.28■□□□□ 0.04
TPCN1-213ENST00000550543 DMXL1Q9Y485 3027 aa15.28■□□□□ 0.04
TPCN1-213ENST00000550543 TNNC2P02585 160 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 ITGB3P05106 788 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 ZNF806P0C7X5 589 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 ADSSP30520 456 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 STAT6P42226 847 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 MAGEA11P43364 429 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 PPP3CCP48454 512 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 IFNAR2P48551 515 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 ELF2Q15723 593 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 PPM1JQ5JR12 505 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 VSTM1Q6UX27 236 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 CRELD2Q6UXH1 353 aaPredicted RBP15.27■□□□□ 0.04
TPCN1-213ENST00000550543 LRRTM3Q86VH5 581 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 CCDC65Q8IXS2 484 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 CSGALNACT2Q8N6G5 542 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 OSCP1Q8WVF1 389 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 PI4K2AQ9BTU6 479 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 EBF3Q9H4W6 596 aa15.27■□□□□ 0.04
TPCN1-213ENST00000550543 ACACBO00763 2458 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms