RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	NKX6-1	P78426	367 aa	Predicted RBP	5.83	□□□□□ -1.48
CNOT2-222	ENST00000550155	VPS53	Q5VIR6	699 aa		5.83	□□□□□ -1.48
CNOT2-222	ENST00000550155	DTX2	Q86UW9	622 aa		5.83	□□□□□ -1.48
CNOT2-222	ENST00000550155	FAM109A	Q8N4B1	249 aa		5.83	□□□□□ -1.48
CNOT2-222	ENST00000550155	HPS3	Q969F9	1004 aa		5.83	□□□□□ -1.48
CNOT2-222	ENST00000550155	DKK3	Q9UBP4	350 aa		5.83	□□□□□ -1.48
CNOT2-222	ENST00000550155	HESX1	Q9UBX0	185 aa		5.83	□□□□□ -1.48
CNOT2-222	ENST00000550155	PCDHA6	Q9UN73	950 aa		5.83	□□□□□ -1.48
CNOT2-222	ENST00000550155	STXBP5L	Q9Y2K9	1186 aa		5.83	□□□□□ -1.48
CNOT2-222	ENST00000550155	PLEKHM1	Q9Y4G2	1056 aa		5.83	□□□□□ -1.48
CNOT2-222	ENST00000550155	E2F8	A0AVK6	867 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	MYO1C	O00159	1063 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	QSOX1	O00391	747 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	SLC16A3	O15427	465 aa	Known RBP	5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	ONECUT2	O95948	504 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	HDC	P19113	662 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	DRD4	P21917	467 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	PROK1	P58294	105 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	SLC10A2	Q12908	348 aa	Predicted RBP	5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	FOXF2	Q12947	444 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	ATAT1	Q5SQI0	421 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	CEP85	Q6P2H3	762 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	SLC29A4	Q7RTT9	530 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	CGRRF1	Q99675	332 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	PTDSS2	Q9BVG9	487 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	SLC29A3	Q9BZD2	475 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	CPA4	Q9UI42	421 aa		5.82	□□□□□ -1.48
CNOT2-222	ENST00000550155	KAT6A	Q92794	2004 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	ALDH1L1	O75891	902 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	UNC5C	O95185	931 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	GRP	P07492	148 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	GRM1	Q13255	1194 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	BOP1	Q14137	746 aa	Known RBP	5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	ANKRD16	Q6P6B7	361 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	ZNF804A	Q7Z570	1209 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	FANCB	Q8NB91	859 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	GPATCH3	Q96I76	525 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	ARMT1	Q9H993	441 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	ADAM21	Q9UKJ8	722 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	SHOC2	Q9UQ13	582 aa		5.81	□□□□□ -1.48
CNOT2-222	ENST00000550155	TARM1	B6A8C7	271 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	AP1G1	O43747	822 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	DNAJB5	O75953	348 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	JTB	O76095	146 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	ALDH2	P05091	517 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	TH	P07101	528 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	PDHA1	P08559	390 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	HSPA6	P17066	643 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	PPIF	P30405	207 aa	Known RBP	5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	ZNF134	P52741	427 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	PDE1A	P54750	535 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	IGBP1	P78318	339 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	KRTAP1-1	Q07627	177 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	E2F2	Q14209	437 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	FGL2	Q14314	439 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	LLGL1	Q15334	1064 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	ARHGAP40	Q5TG30	622 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	WDR53	Q7Z5U6	358 aa	Predicted RBP	5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	SEMA6D	Q8NFY4	1073 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	TBC1D5	Q92609	795 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	SERTAD3	Q9UJW9	196 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	PNMA8B	Q9ULN7	279 aa	Predicted RBP	5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	SH2B3	Q9UQQ2	575 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	TMX2	Q9Y320	296 aa		5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
CNOT2-222	ENST00000550155	AOX1	Q06278	1338 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	INO80B-WBP1	J3KQ70	363 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	ABLIM3	O94929	683 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	CYP2C9	P11712	490 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	XRCC6	P12956	609 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	CYP2C18	P33260	490 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	VIPR2	P41587	438 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	EEFSEC	P57772	596 aa	Known RBP	5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	LILRA4	P59901	499 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	TMEM119	Q4V9L6	283 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	AARS2	Q5JTZ9	985 aa	Known RBP	5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	TREML2	Q5T2D2	321 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	DAAM2	Q86T65	1068 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	SMG7	Q92540	1137 aa	Known RBP	5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	INO80B	Q9C086	356 aa	Predicted RBP	5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	GLOD4	Q9HC38	313 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	SERHL	Q9NQF3	203 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	PIH1D1	Q9NWS0	290 aa	Known RBP	5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	SH3BP4	Q9P0V3	963 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	ZNF180	Q9UJW8	692 aa		5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	CCNL1	Q9UK58	526 aa	Predicted RBP	5.79	□□□□□ -1.48
CNOT2-222	ENST00000550155	DNAJC9-AS1	A6NH13	148 aa		5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	LINC01548	A6NM66	108 aa		5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	DCLK1	O15075	740 aa		5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	PIN1	Q13526	163 aa	Predicted RBP	5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	TTF1	Q15361	905 aa	Predicted RBP	5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	EZH2	Q15910	746 aa	Known RBP	5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	DENND1C	Q8IV53	801 aa		5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	LRRC71	Q8N4P6	559 aa		5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	DDB2	Q92466	427 aa		5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	DPF1	Q92782	380 aa		5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	NMRK2	Q9NPI5	230 aa		5.78	□□□□□ -1.48
CNOT2-222	ENST00000550155	XPR1	Q9UBH6	696 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms