RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 HOXA7P31268 230 aaPredicted RBP12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 RCVRNP35243 200 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 SOX5P35711 763 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 CASP5P51878 434 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 PEX6Q13608 980 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 EFHC1Q5JVL4 640 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 DPY19L2P1Q6NXN4 242 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 PACS1Q6VY07 963 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 STXBP4Q6ZWJ1 553 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 COX4I2Q96KJ9 171 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 KCTD10Q9H3F6 313 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 WHRNQ9P202 907 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 LGALS13Q9UHV8 139 aa12.51□□□□□ -0.41
RBFOX1-208ENST00000547372 SCN11AQ9UI33 1791 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 MEGF6O75095 1541 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L15C9J2P7 530 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L13C9JLJ4 530 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L11C9JVI0 530 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L18D6R9N7 530 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L22D6RA61 530 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L17D6RBQ6 530 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L19D6RCP7 530 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L20D6RJB6 530 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 E9PBE3 544 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 MATN2O00339 956 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 CBFA2T3O75081 653 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 TM7SF2O76062 418 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 GGPS1O95749 300 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 LDHCP07864 332 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 C6orf222P0C671 652 aaPredicted RBP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 MAPK10P53779 464 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L24Q0WX57 530 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 EPHA7Q15375 998 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 ECM1Q16610 540 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 ZNF568Q3ZCX4 644 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L6PQ6QN14 398 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 UGT2A3Q6UWM9 527 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 TMC7Q7Z402 723 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 BBS5Q8N3I7 341 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 DENND1AQ8TEH3 1009 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 GPR101Q96P66 508 aaPredicted RBP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 OSBPL10Q9BXB5 764 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 SPO11Q9Y5K1 396 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 KIF1AQ12756 1690 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 SH3PXD2BA1X283 911 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 FUOMA2VDF0 154 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 PRR5-ARHGAP8B1AHC4 643 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 BUD23O43709 281 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 ZSCAN5DPP0CG00 497 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 JAM2P57087 298 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 ARHGAP8P85298 464 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 EFTUD2Q15029 972 aaKnown RBP eCLIP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 SLC35G1Q2M3R5 365 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 FRMD5Q7Z6J6 570 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 SLC30A5Q8TAD4 765 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 ACAP3Q96P50 834 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 HNRNPABQ99729 332 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 GPATCH1Q9BRR8 931 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 PLGRKTQ9HBL7 147 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 ACTL7BQ9Y614 415 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 ATP8B3O60423 1300 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 ADAMTS7Q9UKP4 1686 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 DUOX1Q9NRD9 1551 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 A8MU76 341 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 USP17L5A8MUK1 530 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 F8W8V4 182 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 KDM1AO60341 852 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 RFC1P35251 1148 aaPredicted RBP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 KNOP1Q1ED39 458 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 FAM178BQ8IXR5 827 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 CPNE9Q8IYJ1 553 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 DDHD1Q8NEL9 900 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 GFM2Q969S9 779 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 CEP295NLQ96MC4 621 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 Q9H521 79 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 SIX2Q9NPC8 291 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 ATAD3AQ9NVI7 634 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 THEGQ9P2T0 379 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 RABGAP1Q9Y3P9 1069 aa12.5□□□□□ -0.41
RBFOX1-208ENST00000547372 DDX39AO00148 427 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 MCF2LO15068 1137 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 ZMPSTE24O75844 475 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 FGRP09769 529 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 POLR2MP0CAP2 368 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 SMIM18P0DKX4 95 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 MUTP22033 750 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 TGFBIQ15582 683 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 XKR5Q6UX68 686 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 ZNF713Q8N859 430 aaPredicted RBP12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 GABPB2Q8TAK5 448 aaPredicted RBP12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 POLR3CQ9BUI4 534 aaPredicted RBP12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 CYLDQ9NQC7 956 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 RSL24D1Q9UHA3 163 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 MAD2L2Q9UI95 211 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 BCORQ6W2J9 1755 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 J3QRK9 145 aa12.49□□□□□ -0.41
RBFOX1-208ENST00000547372 FOXN3O00409 490 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms