RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 OBSL1O75147 1896 aa15.46■□□□□ 0.06
COL2A1-209ENST00000546974 GABRDO14764 452 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 POLR2DO15514 142 aaKnown RBP15.45■□□□□ 0.06
COL2A1-209ENST00000546974 PRPF40AO75400 957 aaKnown RBP15.45■□□□□ 0.06
COL2A1-209ENST00000546974 F13A1P00488 732 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 HSP90AA1P07900 732 aaKnown RBP15.45■□□□□ 0.06
COL2A1-209ENST00000546974 CSH1P0DML2 217 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 CSH2P0DML3 217 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 HMGA1P17096 107 aaKnown RBP15.45■□□□□ 0.06
COL2A1-209ENST00000546974 CCNE1P24864 410 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 LHX1P48742 406 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 CYP4F8P98187 520 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 MYO1EQ12965 1108 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 MTAPQ13126 283 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 DUOXA2Q1HG44 320 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 INTS6LQ5JSJ4 861 aaKnown RBP15.45■□□□□ 0.06
COL2A1-209ENST00000546974 FAM26FQ5R3K3 315 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 ATL3Q6DD88 541 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 UNC13DQ70J99 1090 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 DPH6Q7L8W6 267 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 CBWD2Q8IUF1 395 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 GPIHBP1Q8IV16 184 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 NELL1Q92832 810 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 FAM84AQ96KN4 292 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 PI4K2AQ9BTU6 479 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 LMAN1LQ9HAT1 526 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 ABCB6Q9NP58 842 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 ZSCAN32Q9NX65 697 aa15.45■□□□□ 0.06
COL2A1-209ENST00000546974 R3HCC1Q9Y3T6 440 aaKnown RBP15.45■□□□□ 0.06
COL2A1-209ENST00000546974 UBE4BO95155 1302 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 KIF26AQ9ULI4 1882 aaPredicted RBP15.44■□□□□ 0.06
COL2A1-209ENST00000546974 SOBPA7XYQ1 873 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 TNNC2P02585 160 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 F11P03951 625 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 CHRNB1P11230 501 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 DDX6P26196 483 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL2A1-209ENST00000546974 KPNA1P52294 538 aaPredicted RBP15.44■□□□□ 0.06
COL2A1-209ENST00000546974 SNRPFP62306 86 aaKnown RBP15.44■□□□□ 0.06
COL2A1-209ENST00000546974 PLCB2Q00722 1185 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 EHHADHQ08426 723 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 LMBRD2Q68DH5 695 aaPredicted RBP15.44■□□□□ 0.06
COL2A1-209ENST00000546974 OSTM1Q86WC4 334 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 WDR49Q8IV35 697 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 ADGRF2Q8IZF7 708 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 SUMF1Q8NBK3 374 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 ZBTB44Q8NCP5 570 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 OR5B17Q8NGF7 314 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 BPIFB1Q8TDL5 484 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 ATRIPQ8WXE1 791 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 PKMYT1Q99640 499 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 SLC46A2Q9BY10 475 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 FAM126AQ9BYI3 521 aaPredicted RBP15.44■□□□□ 0.06
COL2A1-209ENST00000546974 FAM13BQ9NYF5 915 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 GTF3C4Q9UKN8 822 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 PCDHA7Q9UN72 937 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 DNAH14Q0VDD8 3507 aa15.44■□□□□ 0.06
COL2A1-209ENST00000546974 PTPRJQ12913 1337 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 MYBPHLA2RUH7 354 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 TGFB1I1O43294 461 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 PRAMEF12O95522 483 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 ACAT1P24752 427 aaKnown RBP15.43■□□□□ 0.06
COL2A1-209ENST00000546974 PCSK1P29120 753 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 NLRP12P59046 1061 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 RPL10AP62906 217 aaKnown RBP15.43■□□□□ 0.06
COL2A1-209ENST00000546974 PPP2R5DQ14738 602 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 SOWAHAQ2M3V2 549 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 FOXD4L6Q3SYB3 417 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-209ENST00000546974 FOXD4L3Q6VB84 417 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-209ENST00000546974 LIMS2Q7Z4I7 341 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 TMEM150AQ86TG1 271 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 RALGPS2Q86X27 583 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-209ENST00000546974 CMTM8Q8IZV2 173 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 CELF5Q8N6W0 485 aaKnown RBP15.43■□□□□ 0.06
COL2A1-209ENST00000546974 RUBCNQ92622 972 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 FUBP3Q96I24 572 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL2A1-209ENST00000546974 HPDLQ96IR7 371 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 AGPAT3Q9NRZ7 376 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 THG1LQ9NWX6 298 aaKnown RBP15.43■□□□□ 0.06
COL2A1-209ENST00000546974 UXTQ9UBK9 157 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-209ENST00000546974 CFAP45Q9UL16 551 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 GPR179Q6PRD1 2367 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 GREB1Q4ZG55 1949 aa15.43■□□□□ 0.06
COL2A1-209ENST00000546974 PVALEFA0A1B0GWK0 134 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 SLC38A8A6NNN8 435 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 SPECC1L-ADORA2AF8WAN1 911 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 LILRB5O75023 590 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 NOL4O94818 638 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 CYP2F1P24903 491 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 ME1P48163 572 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 GPR15P49685 360 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 LRRC32Q14392 662 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 SNRNP35Q16560 246 aaKnown RBP15.42■□□□□ 0.06
COL2A1-209ENST00000546974 CFAP221Q4G0U5 840 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 RESP18Q5W5W9 173 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 FAM171BQ6P995 826 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 TSSK4Q6SA08 328 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 TRAPPC11Q7Z392 1133 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 SPATA2LQ8IUW3 424 aaPredicted RBP15.42■□□□□ 0.06
COL2A1-209ENST00000546974 SCFD1Q8WVM8 642 aa15.42■□□□□ 0.06
COL2A1-209ENST00000546974 MRPS31Q92665 395 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms