RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 NXPH3O95157 252 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 UNC5CO95185 931 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 PRKCGP05129 697 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 HNRNPCP07910 306 aaKnown RBP eCLIP6.03□□□□□ -1.44
SNHG1-224ENST00000545688 VCAM1P19320 739 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 IBSPP21815 317 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-224ENST00000545688 LONRF3Q496Y0 759 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 TEDDM1Q5T9Z0 273 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 MAVSQ7Z434 540 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 CDK5RAP3Q96JB5 506 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 NELL2Q99435 816 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 MAP3K14Q99558 947 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 CGRRF1Q99675 332 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 SERGEFQ9UGK8 458 aa6.03□□□□□ -1.44
SNHG1-224ENST00000545688 ABLIM3O94929 683 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 NDUFB7P17568 137 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 CLCN2P51788 898 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 LOXL3P58215 753 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 LILRA4P59901 499 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 TFF2Q03403 129 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 ZNF267Q14586 743 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-224ENST00000545688 TMEM119Q4V9L6 283 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 ZNF618Q5T7W0 954 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 PLBD2Q8NHP8 589 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 ARMT1Q9H993 441 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 SERTAD3Q9UJW9 196 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 ANKRD6Q9Y2G4 727 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 STXBP5LQ9Y2K9 1186 aa6.02□□□□□ -1.45
SNHG1-224ENST00000545688 ANKRD62A6NC57 917 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 LINC01548A6NM66 108 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 GRPP07492 148 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 ATXN1LP0C7T5 689 aaKnown RBP6.01□□□□□ -1.45
SNHG1-224ENST00000545688 KCNJ5P48544 419 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 SP2Q02086 613 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 KHDC1LQ5JSQ8 128 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 ATAT1Q5SQI0 421 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 ICE2Q659A1 982 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 SUMO4Q6EEV6 95 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 SFRP4Q6FHJ7 346 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-224ENST00000545688 LAYNQ6UX15 382 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 DTX2Q86UW9 622 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 SLC12A5Q9H2X9 1139 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 SARS2Q9NP81 518 aaKnown RBP6.01□□□□□ -1.45
SNHG1-224ENST00000545688 SSX2IPQ9Y2D8 614 aa6.01□□□□□ -1.45
SNHG1-224ENST00000545688 TARM1B6A8C7 271 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 H0YIZ8 118 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 SLC16A3O15427 465 aaKnown RBP6□□□□□ -1.45
SNHG1-224ENST00000545688 OFD1O75665 1012 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 CELA2AP08217 269 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 LIPAP38571 399 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 IQCB1Q15051 598 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 IFIT1BQ5T764 474 aaKnown RBP6□□□□□ -1.45
SNHG1-224ENST00000545688 ARHGAP40Q5TG30 622 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 PAPD7Q5XG87 772 aaKnown RBP6□□□□□ -1.45
SNHG1-224ENST00000545688 ZNF782Q6ZMW2 699 aaPredicted RBP6□□□□□ -1.45
SNHG1-224ENST00000545688 MTFMTQ96DP5 389 aaKnown RBP6□□□□□ -1.45
SNHG1-224ENST00000545688 C1GALT1C1Q96EU7 318 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 RNF7Q9UBF6 113 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 CPA4Q9UI42 421 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 PLEKHM1Q9Y4G2 1056 aa6□□□□□ -1.45
SNHG1-224ENST00000545688 ZNF213O14771 459 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 TLR5O60602 858 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 ALDH1L1O75891 902 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 ERBB2P04626 1255 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 IL6RP08887 468 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-224ENST00000545688 FAM163BP0C2L3 166 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 CT47B1P0C2W7 299 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-224ENST00000545688 PPIFP30405 207 aaKnown RBP5.99□□□□□ -1.45
SNHG1-224ENST00000545688 PXNP49023 591 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-224ENST00000545688 ALDH9A1P49189 494 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 SLC10A2Q12908 348 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-224ENST00000545688 TREML2Q5T2D2 321 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 CEP85Q6P2H3 762 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 SEMA6DQ8NFY4 1073 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 ATG4AQ8WYN0 398 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 PTDSS2Q9BVG9 487 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 RHOBTB2Q9BYZ6 727 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 SLC29A3Q9BZD2 475 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 DLL3Q9NYJ7 618 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 SH3BP4Q9P0V3 963 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 STAP2Q9UGK3 403 aa5.99□□□□□ -1.45
SNHG1-224ENST00000545688 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.99□□□□□ -1.45
SNHG1-224ENST00000545688 AP1G1O43747 822 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 RAB1AP62820 205 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 MCL1Q07820 350 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 LLGL1Q15334 1064 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 TTF1Q15361 905 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-224ENST00000545688 AMOTQ4VCS5 1084 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 RGS7BPQ6MZT1 257 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-224ENST00000545688 ANKRD16Q6P6B7 361 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 SLC29A4Q7RTT9 530 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 GLCCI1Q86VQ1 547 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 DIS3LQ8TF46 1054 aaKnown RBP5.98□□□□□ -1.45
SNHG1-224ENST00000545688 STAG1Q8WVM7 1258 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 TBC1D5Q92609 795 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 REPS1Q96D71 796 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 MRGPRX1Q96LB2 322 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 TYW1Q9NV66 732 aaKnown RBP5.98□□□□□ -1.45
SNHG1-224ENST00000545688 FLRT1Q9NZU1 646 aa5.98□□□□□ -1.45
SNHG1-224ENST00000545688 ABCC9O60706 1549 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms