RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 KLRC2P26717 231 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 GNA15P30679 374 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 CASP14P31944 242 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 ZBED6P86452 979 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 ROR1Q01973 937 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 PTK2Q05397 1052 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 GRIN2CQ14957 1233 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 NFE2Q16621 373 aaPredicted RBP13.83□□□□□ -0.2
CDCA3-210ENST00000545368 SLC39A12Q504Y0 691 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 MDH1BQ5I0G3 518 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 SFMBT2Q5VUG0 894 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 C4orf50Q6ZRC1 276 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 FAM71AQ8IYT1 594 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 CRYBG2Q8N1P7 616 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 SLC4A11Q8NBS3 891 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 BAP1Q92560 729 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 HEXIM2Q96MH2 286 aaKnown RBP13.83□□□□□ -0.2
CDCA3-210ENST00000545368 KLHL5Q96PQ7 755 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 TMEM209Q96SK2 561 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 GAS2L1Q99501 681 aaPredicted RBP13.83□□□□□ -0.2
CDCA3-210ENST00000545368 LMCD1Q9NZU5 365 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 GTF3C4Q9UKN8 822 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 KIAA1257Q9ULG3 409 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 PCDHGC5Q9Y5F6 944 aa13.83□□□□□ -0.2
CDCA3-210ENST00000545368 AKR1B15C9JRZ8 316 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-210ENST00000545368 CYP26A1O43174 497 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 MED7O43513 233 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 ATP2C2O75185 946 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 VDRP11473 427 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 FERP16591 822 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 KRT9P35527 623 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 FXR1P51114 621 aaKnown RBP eCLIP13.82□□□□□ -0.2
CDCA3-210ENST00000545368 PDE6CP51160 858 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 ZNF132P52740 706 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 CYP27A1Q02318 531 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 GPR17Q13304 367 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 RAB33AQ14088 237 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 ASIC2Q16515 512 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 TSR1Q2NL82 804 aaKnown RBP13.82□□□□□ -0.2
CDCA3-210ENST00000545368 SGO2Q562F6 1265 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 TPGS2Q68CL5 300 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 FAM171BQ6P995 826 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 RSPO2Q6UXX9 243 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-210ENST00000545368 SPATA2LQ8IUW3 424 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-210ENST00000545368 CNGA4Q8IV77 575 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 MYCBPAPQ8TBZ2 947 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 SPPL2BQ8TCT7 592 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 C2orf15Q8WU43 125 aaKnown RBP13.82□□□□□ -0.2
CDCA3-210ENST00000545368 MYLPFQ96A32 169 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 FAM161BQ96MY7 647 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 CDCA3Q99618 268 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-210ENST00000545368 MED10Q9BTT4 135 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 NSUN3Q9H649 340 aaKnown RBP13.82□□□□□ -0.2
CDCA3-210ENST00000545368 CRTAC1Q9NQ79 661 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 FAM49BQ9NUQ9 324 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 IMPACTQ9P2X3 320 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 MYO9BQ13459 2157 aa13.82□□□□□ -0.2
CDCA3-210ENST00000545368 WDR27A2RRH5 827 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 MYBPHLA2RUH7 354 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 MTMR11A4FU01 709 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 RNF225M0QZC1 329 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-210ENST00000545368 ADAM12O43184 909 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 THAP12O43422 761 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 MFAP3LO75121 409 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 GLUD1P00367 558 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 ELF1P32519 619 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 ARID5AQ03989 594 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 TBX2Q13207 712 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-210ENST00000545368 STILQ15468 1287 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 ELMSAN1Q6PJG2 1045 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 LRRTM3Q86VH5 581 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 PALB2Q86YC2 1186 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 SPC24Q8NBT2 197 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 ZNF461Q8TAF7 563 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 PCED1BQ96HM7 432 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 FUBP3Q96I24 572 aaKnown RBP eCLIP13.81□□□□□ -0.2
CDCA3-210ENST00000545368 PGLYRP2Q96PD5 576 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 PKMYT1Q99640 499 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 TLE6Q9H808 572 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 ZNHIT6Q9NWK9 470 aaKnown RBP13.81□□□□□ -0.2
CDCA3-210ENST00000545368 ABI2Q9NYB9 513 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-210ENST00000545368 AFF4Q9UHB7 1163 aaKnown RBP13.81□□□□□ -0.2
CDCA3-210ENST00000545368 MAFFQ9ULX9 164 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 PCDHB5Q9Y5E4 795 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
CDCA3-210ENST00000545368 PLXNA3P51805 1871 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 LAMA3Q16787 3333 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 CLASP2O75122 1294 aaKnown RBP13.8□□□□□ -0.2
CDCA3-210ENST00000545368 C1RP00736 705 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 CCDC130P13994 396 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 ATF2P15336 505 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 CYP11B1P15538 503 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 IGFBP4P22692 258 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 BRD2P25440 801 aaKnown RBP13.8□□□□□ -0.2
CDCA3-210ENST00000545368 ADORA2BP29275 332 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 CLCN1P35523 988 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 CLCN4P51793 760 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 ADCY1Q08828 1119 aa13.8□□□□□ -0.2
CDCA3-210ENST00000545368 PPP1R26Q5T8A7 1209 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-210ENST00000545368 ARHGAP17Q68EM7 881 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms