RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 GVINP1Q7Z2Y8 2422 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 LRRIQ3A6PVS8 624 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-216ENST00000544989 SOBPA7XYQ1 873 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 STX10O60499 249 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 CSH1P0DML2 217 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 CSH2P0DML3 217 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 DDX6P26196 483 aaKnown RBP eCLIP12.64□□□□□ -0.392e-8■■■■■ 260
HDAC4-216ENST00000544989 GNL1P36915 607 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-216ENST00000544989 MAGEA11P43364 429 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 FOXK2Q01167 660 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 ADAM9Q13443 819 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 PNOCQ13519 176 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 NCOA4Q13772 614 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 SGSM1Q2NKQ1 1148 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 WDR72Q3MJ13 1102 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 LRRTM3Q86VH5 581 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 SPATA2LQ8IUW3 424 aaPredicted RBP12.64□□□□□ -0.39
HDAC4-216ENST00000544989 SPATA20Q8TB22 786 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 DEPDC1BQ8WUY9 529 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 RSAD2Q8WXG1 361 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 ASB16Q96NS5 453 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 SYT15Q9BQS2 421 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 IMPG2Q9BZV3 1241 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 DNAI2Q9GZS0 605 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 DNAJC25Q9H1X3 360 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 CRISPLD1Q9H336 500 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 TRPV4Q9HBA0 871 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 EHD2Q9NZN4 543 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 NOTCH4Q99466 2003 aa12.64□□□□□ -0.39
HDAC4-216ENST00000544989 CETN3O15182 167 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 CLSTN1O94985 981 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 CST3P01034 146 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-216ENST00000544989 EPB41P11171 864 aaKnown RBP12.63□□□□□ -0.39
HDAC4-216ENST00000544989 WEE1P30291 646 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 AVPR2P30518 371 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 GTF2H1P32780 548 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 CCR2P41597 374 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 VAMP7P51809 220 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 PRKCQQ04759 706 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 ZNF699Q32M78 642 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 PHLDB3Q6NSJ2 640 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 FAM171BQ6P995 826 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 VSTM1Q6UX27 236 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 TMC8Q8IU68 726 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 HS6ST3Q8IZP7 471 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 SIX5Q8N196 739 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 CCDC150Q8NCX0 1101 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 SHKBP1Q8TBC3 707 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 KBTBD7Q8WVZ9 684 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 ZNF516Q92618 1163 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 TCEAL4Q96EI5 215 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 PKMYT1Q99640 499 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 LRRC3Q9BY71 257 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 OBP2AQ9NY56 170 aa12.63□□□□□ -0.39
HDAC4-216ENST00000544989 MAGEC2Q9UBF1 373 aaPredicted RBP12.63□□□□□ -0.39
HDAC4-216ENST00000544989 PSMA7O14818 248 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 TRIM66O15016 1216 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 SLC16A3O15427 465 aaKnown RBP12.62□□□□□ -0.39
HDAC4-216ENST00000544989 NARSO43776 548 aaKnown RBP12.62□□□□□ -0.39
HDAC4-216ENST00000544989 C4BPAP04003 597 aaKnown RBP12.62□□□□□ -0.39
HDAC4-216ENST00000544989 CFHP08603 1231 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 ATF6P18850 670 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 ACAT1P24752 427 aaKnown RBP12.62□□□□□ -0.39
HDAC4-216ENST00000544989 GABRR2P28476 465 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 CASP4P49662 377 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 PTPN5P54829 565 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 MYL6P60660 151 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 LRRC63Q05C16 580 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 TEAD2Q15562 447 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 ZACNQ401N2 412 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 ZCWPW2Q504Y3 356 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 FAM78AQ5JUQ0 283 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 TDRD10Q5VZ19 366 aaKnown RBP12.62□□□□□ -0.39
HDAC4-216ENST00000544989 OSTM1Q86WC4 334 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 TTC9BQ8N6N2 239 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 OR6B3Q8NGW1 331 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 ZSCAN18Q8TBC5 510 aaPredicted RBP12.62□□□□□ -0.39
HDAC4-216ENST00000544989 MYCBPAPQ8TBZ2 947 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 GPR152Q8TDT2 470 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 DNASE1L2Q92874 299 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 IRF7Q92985 503 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 TRMT2BQ96GJ1 504 aaKnown RBP12.62□□□□□ -0.39
HDAC4-216ENST00000544989 FAXDC2Q96IV6 333 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 FAM84AQ96KN4 292 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 TNIP3Q96KP6 325 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 KXD1Q9BQD3 176 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 PI4K2AQ9BTU6 479 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 TRMT61BQ9BVS5 477 aaKnown RBP12.62□□□□□ -0.39
HDAC4-216ENST00000544989 GZF1Q9H116 711 aaPredicted RBP12.62□□□□□ -0.39
HDAC4-216ENST00000544989 XYLT2Q9H1B5 865 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 ATXN3LQ9H3M9 355 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 SMOC2Q9H3U7 446 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 ARHGEF3Q9NR81 526 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 NXF1Q9UBU9 619 aaKnown RBP12.62□□□□□ -0.39
HDAC4-216ENST00000544989 GTF3C4Q9UKN8 822 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 MAPK8IP1Q9UQF2 711 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 PCDHA5Q9Y5H7 936 aa12.62□□□□□ -0.39
HDAC4-216ENST00000544989 DNAH14Q0VDD8 3507 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms