RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 TOP6BLQ8N6T0 577 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 UBA3Q8TBC4 463 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 SEZ6LQ9BYH1 1024 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 PAK6Q9NQU5 681 aaPredicted RBP20.98■□□□□ 0.95
COPS7A-218ENST00000543939 WDR35Q9P2L0 1181 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 IP6K2Q9UHH9 426 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 LCMT1Q9UIC8 334 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 A8MXQ7 604 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 CCDC188H7C350 402 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 DNM1LO00429 736 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 KRIT1O00522 736 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 HUS1O60921 280 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 ERBB2P04626 1255 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 PFKMP08237 780 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 FAM163BP0C2L3 166 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 SKIP12755 728 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 GNL1P36915 607 aaPredicted RBP20.98■□□□□ 0.95
COPS7A-218ENST00000543939 SCNN1GP51170 649 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 RWDD2BP57060 319 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 ZNF268Q14587 947 aaPredicted RBP20.98■□□□□ 0.95
COPS7A-218ENST00000543939 GOLGA7BQ2TAP0 167 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 PKDCCQ504Y2 493 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 PPP1R26Q5T8A7 1209 aaPredicted RBP20.98■□□□□ 0.95
COPS7A-218ENST00000543939 ARHGAP17Q68EM7 881 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 C8orf74Q6P047 294 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 CC2D1AQ6P1N0 951 aaPredicted RBP20.98■□□□□ 0.95
COPS7A-218ENST00000543939 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.98■□□□□ 0.95
COPS7A-218ENST00000543939 HDAC7Q8WUI4 952 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 RUBCNQ92622 972 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 PGBD4Q96DM1 585 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 NAP1L3Q99457 506 aaPredicted RBP20.98■□□□□ 0.95
COPS7A-218ENST00000543939 AP1M1Q9BXS5 423 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 DPEP3Q9H4B8 488 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 RSAD1Q9HA92 442 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 ZNF446Q9NWS9 450 aa20.98■□□□□ 0.95
COPS7A-218ENST00000543939 PYGMP11217 842 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 WARSP23381 471 aaKnown RBP20.97■□□□□ 0.95
COPS7A-218ENST00000543939 MCM3P25205 808 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 ZNF252P-AS1Q0IIN9 211 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 LONRF2Q1L5Z9 754 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 AADACL2Q6P093 401 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 TMCO3Q6UWJ1 677 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 ZNF598Q86UK7 904 aaKnown RBP20.97■□□□□ 0.95
COPS7A-218ENST00000543939 XYLT1Q86Y38 959 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 ADGRF2Q8IZF7 708 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 HNRNPLLQ8WVV9 542 aaKnown RBP20.97■□□□□ 0.95
COPS7A-218ENST00000543939 MCEEQ96PE7 176 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 KRT12Q99456 494 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 SNX25Q9H3E2 840 aa20.97■□□□□ 0.95
COPS7A-218ENST00000543939 DMGDHQ9UI17 866 aaKnown RBP20.97■□□□□ 0.95
COPS7A-218ENST00000543939 SIGLEC16A6NMB1 481 aa20.96■□□□□ 0.95
COPS7A-218ENST00000543939 HCRTO43612 131 aa20.96■□□□□ 0.95
COPS7A-218ENST00000543939 LMO2P25791 158 aa20.96■□□□□ 0.95
COPS7A-218ENST00000543939 PSMC1P62191 440 aaKnown RBP20.96■□□□□ 0.95
COPS7A-218ENST00000543939 SEL1L2Q5TEA6 688 aa20.96■□□□□ 0.95
COPS7A-218ENST00000543939 DCUN1D2Q6PH85 259 aa20.96■□□□□ 0.95
COPS7A-218ENST00000543939 ECHDC2Q86YB7 292 aa20.96■□□□□ 0.95
COPS7A-218ENST00000543939 BEGAINQ9BUH8 593 aa20.96■□□□□ 0.95
COPS7A-218ENST00000543939 UBN1Q9NPG3 1134 aa20.96■□□□□ 0.95
COPS7A-218ENST00000543939 FAM49BQ9NUQ9 324 aa20.96■□□□□ 0.95
COPS7A-218ENST00000543939 CACNG4Q9UBN1 327 aa20.96■□□□□ 0.95
COPS7A-218ENST00000543939 PODXLO00592 558 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 CYB561D2O14569 222 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 ZRANB2O95218 330 aaKnown RBP eCLIP20.95■□□□□ 0.94
COPS7A-218ENST00000543939 IGFBP6P24592 240 aaPredicted RBP20.95■□□□□ 0.94
COPS7A-218ENST00000543939 RPL9P32969 192 aaKnown RBP20.95■□□□□ 0.94
COPS7A-218ENST00000543939 CLCNKBP51801 687 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 MRPS25P82663 173 aaKnown RBP20.95■□□□□ 0.94
COPS7A-218ENST00000543939 OGDHQ02218 1023 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 OSTM1Q86WC4 334 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 TTC30AQ86WT1 665 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 RNF169Q8NCN4 708 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 MCRS1Q96EZ8 462 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 DDX27Q96GQ7 796 aaKnown RBP20.95■□□□□ 0.94
COPS7A-218ENST00000543939 SYNCQ9H7C4 482 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 ARFGAP3Q9NP61 516 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 RGS18Q9NS28 235 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 GOLGA8SH3BPF8 625 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 PSTPIP1O43586 416 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 PDGFRBP09619 1106 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 SETSIPP0DME0 302 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 TAS2R40P59535 323 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 SLC7A5Q01650 507 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 MTFR1Q15390 333 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 DAB2IPQ5VWQ8 1189 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 RTN4RL1Q86UN2 441 aaPredicted RBP20.95■□□□□ 0.94
COPS7A-218ENST00000543939 KLHL7Q8IXQ5 586 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 FAM126BQ8IXS8 530 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 NIPA2Q8N8Q9 360 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 LPIN3Q9BQK8 851 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 NR2E1Q9Y466 385 aa20.95■□□□□ 0.94
COPS7A-218ENST00000543939 INPPL1O15357 1258 aa20.94■□□□□ 0.94
COPS7A-218ENST00000543939 ERLIN1O75477 346 aa20.94■□□□□ 0.94
COPS7A-218ENST00000543939 ZMYND10O75800 440 aa20.94■□□□□ 0.94
COPS7A-218ENST00000543939 SEC31AO94979 1220 aaKnown RBP20.94■□□□□ 0.94
COPS7A-218ENST00000543939 KRT3P12035 628 aa20.94■□□□□ 0.94
COPS7A-218ENST00000543939 PIGHQ14442 188 aaPredicted RBP20.94■□□□□ 0.94
COPS7A-218ENST00000543939 RHOT1Q8IXI2 618 aa20.94■□□□□ 0.94
COPS7A-218ENST00000543939 IPO4Q8TEX9 1081 aaKnown RBP20.94■□□□□ 0.94
COPS7A-218ENST00000543939 SENP8Q96LD8 212 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms